Gene Information

Name : Jden_1874 (Jden_1874)
Accession : YP_003161820.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2052039 - 2052815 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence : 
ATGTCTGCGTCACATACGCACAGTTCACAGATCGCGGTGTCGGCCCGCGGGTTAACAAAGCACTACGGGCACGGCGGTTC
TGTCGTCAAGGCTCTTGACGGTGTGGATATCGATTTTTCTGCTGGCCAGTTCACAGCCATTATGGGTCCGTCTGGTTCGG
GAAAGTCCACCCTCATGCACTTGCTCGCCGGGTTGGACTCCGCCTCATCAGGGCACGCCTACTTGGGTGACACTGAGGTG
ACAGCCCTCAACGACGACCAACTCACCATGCTGCGGCGTGACCGGGTGGGGTTCGTGTTTCAGTCATTTAACTTGCTGCC
CATGTTCACCGCTGAAGCGAACATTTTCTTGCCCTTGACGTTGGCAAACAAAAAAATCACCGCTGACGACCGAGCATGGT
TGCACCAACTCGCTGAAACTCTGGGACTGTCTGACCGCCTGGACCACCGCCCCTCCGAACTCTCCGGTGGTCAGCAGCAG
CGTGTCGCAATCGCGCGGGCACTCATCACGAAACCTGACGTGATTTTCGCTGACGAACCGACCGGGAACTTGGATTCTCG
TTCCGGTGCTGAAGTGCTGTCATTCCTGCGAACCTCAGTGCGCGAACTTGGGCGCACGATCATTATGGTGACGCACGACC
CAGGTGCAGCCGCCTACGCTGATCGCGTTGTTCTTCTTGCTGATGGGCAAATCGCCGGCGACATCCACGAACCGACACCT
GAGTCAGTTCTTGCAGGTCTTGACGCGTTGCGCACCTATTCCGCAACGGCAGTGTGA

Protein sequence : 
MSASHTHSSQIAVSARGLTKHYGHGGSVVKALDGVDIDFSAGQFTAIMGPSGSGKSTLMHLLAGLDSASSGHAYLGDTEV
TALNDDQLTMLRRDRVGFVFQSFNLLPMFTAEANIFLPLTLANKKITADDRAWLHQLAETLGLSDRLDHRPSELSGGQQQ
RVAIARALITKPDVIFADEPTGNLDSRSGAEVLSFLRTSVRELGRTIIMVTHDPGAAAYADRVVLLADGQIAGDIHEPTP
ESVLAGLDALRTYSATAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jden_1874 YP_003161820.1 ABC transporter NC_008702.1.4606598. Protein 7e-40 47
Jden_1874 YP_003161820.1 ABC transporter CP001581.1.gene598.p Protein 1e-51 47
Jden_1874 YP_003161820.1 ABC transporter NC_012469.1.7686878. Protein 5e-45 45
Jden_1874 YP_003161820.1 ABC transporter CP001581.1.gene798.p Protein 4e-45 43