Gene Information

Name : Jden_2118 (Jden_2118)
Accession : YP_003162058.1
Strain : Jonesia denitrificans DSM 20603
Genome accession: NC_013174
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2314289 - 2315068 bp
Length : 780 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit

DNA sequence : 
ATGGCGACAGCAACACTTGACCACACCCCTGTGGACGCGGACGTGATCGCCCGCGCCAGGAACCTGACCAAGGTCTATGG
GCGCGGTAGCACAACCGTGCGCGCCCTTGATGACGTGTCCGTTGATTTCGCGCGCGGGAAATTCACCGCCATCATGGGCC
CTTCCGGCTCAGGGAAGTCCACATTGATGCACTGCATGGCAGGGCTAGACACAGTGACCTCAGGGGAGGTCATTGTGGAT
GGAGATCCCGTGTCTTCCATGAATCAACGCCAACTCACAAAACTTCGCCGCACCCGATTGGGCTTTATTTTCCAGTCATT
TAACCTTGTCCCCACGTTAACCGCGCGGGAGAACATTACTCTGCCGCTCGACATTGCCCGCCAGCCCGTCGATGAGGAGT
TCTTCGAGCAGGTTGTGTCCACTGTGGGGTTGGGAAACCGGTTGAAGCACCGCCCCGCCGAGCTATCTGGTGGCCAACAA
CAACGTGTTGCGTGCGCCCGTGCGTTAGTGTCCAAACCGTCGGTAGTTTTCGCTGACGAACCGACAGGGAACCTCGATTC
TACGTCGTCGCGGGAAGTTCTCACCTTCCTGCGTGAGTCAGTAGACACCCTGGGGCAGTCCGTTGTCATGGTGACGCACG
ACCCGGTCGCTGCGTCCTACGCCCACCGGGTGTTGTTCCTCGCTGACGGGAAAATTGTCACCGAAATCACCGACCCCACC
CCGGACTCAATCCTCACCGTGCTGTCCGAGCTCACTCAAGCGGTAGGAGAGTCCAACTGA

Protein sequence : 
MATATLDHTPVDADVIARARNLTKVYGRGSTTVRALDDVSVDFARGKFTAIMGPSGSGKSTLMHCMAGLDTVTSGEVIVD
GDPVSSMNQRQLTKLRRTRLGFIFQSFNLVPTLTARENITLPLDIARQPVDEEFFEQVVSTVGLGNRLKHRPAELSGGQQ
QRVACARALVSKPSVVFADEPTGNLDSTSSREVLTFLRESVDTLGQSVVMVTHDPVAASYAHRVLFLADGKIVTEITDPT
PDSILTVLSELTQAVGESN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Jden_2118 YP_003162058.1 ABC transporter CP001581.1.gene598.p Protein 3e-47 48
Jden_2118 YP_003162058.1 ABC transporter CP001581.1.gene798.p Protein 1e-39 46
Jden_2118 YP_003162058.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 43
Jden_2118 YP_003162058.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 42