Gene Information

Name : Lebu_1901 (Lebu_1901)
Accession : YP_003164757.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 2013850 - 2014776 bp
Length : 927 bp
Strand : -
Note : PFAM: transketolase; transketolase domain protein; KEGG: fnu:FN0295 transketolase

DNA sequence :
ATGGAAAAAAAATCAACTAGAGTGGCTTACGGAGAAGCGTTAGTTAAATTGGGAAAAATGAATGAGGACATAGTAGTATT
AGAAGCAGATTTGTCAAAATCAACAATGACTGCATATTTTCAAAAGGAATTTCCAGAAAGACATATAAATTTAGGAATTG
CGGAAGCTGATATGATTGTTACAGCTGCAGGATTTGCAACAACAGGGAAAATAGCTTTTGCATCAACTTTTGCTCATTTT
GCCGCAGGTCGTGCTTTTGATCAAATCAGAAATTCAGTAGCATATCCACAATTAAATGTAAAAATTTGCCCAACTCACGC
AGGAATTTCGCTGGGAGAAGATGGAGGCTCACACCAGTCAGTTGAAGATGTGGCTTTAATGCGTGCAATTCCGGGAATGG
TCGTATTATCTCCAGCAGATGCGGTTGAAACGGAAAAAATGATTTTTGCTGTAGCTGAATATGAAGGACCTGTTTATGTA
AGATTGGGAAGATTGAATATTCCAGTATTATTTGATGAAAATTATAAGTTTGAAATAGGAAAAGCAGTGACTTTGAGAGA
AGGAAATGATGTGGCAATTTTAGCAACAGGACTTATGGTTTTAGAAGCCCTTGAGGCTACAAAATTATTGGAAGAAAAAG
GTGTAAAGGCAAGAGTAATCAATGTTTCTACAATAAAACCTTTAGATAAAGAAACTGTTTTGAAAGCTGCAAAAGAATGT
AAGTTTATTGTAACAAGTGAAGAACATTCTGTAATTGGAGGGCTTGGAAGCGCGGTTTCAGAATATTTGTCAGAAGTTCA
CCCAACAAAAGTGATAAAACACGGAATACAGGATATTTTTGGACAAAGTGCGGACGGAGAAACTATGCTTACGAATTACG
GGCTTAGAGCGAAGGATATTGCAGAAACAGTTTTGAAAAATCTATAA

Protein sequence :
MEKKSTRVAYGEALVKLGKMNEDIVVLEADLSKSTMTAYFQKEFPERHINLGIAEADMIVTAAGFATTGKIAFASTFAHF
AAGRAFDQIRNSVAYPQLNVKICPTHAGISLGEDGGSHQSVEDVALMRAIPGMVVLSPADAVETEKMIFAVAEYEGPVYV
RLGRLNIPVLFDENYKFEIGKAVTLREGNDVAILATGLMVLEALEATKLLEEKGVKARVINVSTIKPLDKETVLKAAKEC
KFIVTSEEHSVIGGLGSAVSEYLSEVHPTKVIKHGIQDIFGQSADGETMLTNYGLRAKDIAETVLKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 5e-42 48
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 6e-34 47
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 3e-43 43
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 2e-43 43