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Name : secD (CAP2UW1_2517) Accession : YP_003167733.1 Strain : Candidatus Accumulibacter phosphatis UW-1 Genome accession: NC_013194 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2903650 - 2905527 bp Length : 1878 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGAACCGCTACCCGCTCTGGAAATACGTTCTCGTCGCCATCGCACTGGTGCTCGGTCTGGTTTACACCTTGCCGAACTT CTTCGGCGAGTCGCCGGCTGTCCAGGTTTCCAGCGCCAAAGCCACTCTCAAGGTTGATGAGAAGACGCGAGAACGGGTCG CCAGCACGCTACGGAGCGCCAGCATCGAGAACAGCGGCATCTTCCTCGACAGCAACGGCGTCAAGGTTCGCTTGCTCAAC GCCGACAGTCAGTTGCAAGCAAAGGACCTGCTTGAAAAGCAGTTCAACCCGGACCCCACCGACCCCCAGTATGTCGTCGC CCTGAATCTGCTGTCGAGTTCGCCTCAATGGCTGACCAACCTGCATGCGCTGCCGATGTACCTCGGCCTCGACCTGCGCG GCGGCGTACATTTTCTGCTTCAGGTGGACATGAAGGGCGCGCTGACCAAGCGTCTCGACTCGATCAGCGGCGATTTGCGT AGTCTGCTACGCGACAAGAATGTCCGGCATGCCGGCATCACCCGCGAGGGCGAACGCCTGACCATTCGCTTCCGCGACGG CGATACCCGCGCCAAAGCACGAATCGTCCTCGAGGACAATCAGTCCGATCTGCTGCTGGCTGATCAGGGAGAAGGCGACG ATCTCAAACTGGTCGCCACCCTGAAGCCGGAAGCGATCAAGCGCATCCAGGAATTCGCCGTCAAGCAGAACATGACGACG CTGAGCAACCGCATCAATGAACTTGGGGTCGCCGAACCGGTGATCGCCCAGCAGGGTGCCGATCGTATCGTTGTGCAGTT GCCTGGGGTTCAGGACACCGCCAAGGCCAAGGACATCCTCGGGCGCACGGCGACGCTCGAAATCCGCATGGTCGAGGAGA CCGCCGGAGCCCTCGAGGCGGCCCAGGCCGGCCAGGTCCCCTTCGGCACCGAACTCTATGTCGAACGCGGCGGCCTGCCC CTTCTCGTCAGGAAGCAGGTGGTACTCACCGGCGACCGGTTGACCGATGCGCAGCCCGGCTTTGACAACCAGACGCACGA ACCGGCCGTCCACCTGACGCTCGACTCGGCCGGCGCACGTATCTTCAAGGATGTCACGCGCGACAACGTCGGCAAGCGAA TGGCGATCGTGCTGATCGAGAAGGGCAAGGGCGAGGTGGTTACCGCACCAGTGATCAGGGCGGAAATCGGCGGCGGGCGC GTACAGATTTCTGGCCGCATGAGCACGATGGAAGCCAACGACACGGCGCTGTTGCTGCGCGCAGGCTCCCTGGCCGCACC GATGGAGATCATCGAGGAGCGGGCGATCGGTCCGAGCCTCGGCGCCGAGAACATCAAGAAGGGCTTCCACTCGACGATGT GGGGCTTTGCCGCGATTGCCGTCTTCATGATCGCCTACTACGTCCTGTTCGGCCTGGTGTCGGTGATTGCCCTGGCCGCC AACCTGCTCTTCCTGGTTGCCCTGCTCTCGCTCCTGCAGGCGACGCTGACCTTGCCGGGAATCGCCGCCATCGCCTTGGC ACTCGGCATGGCCATCGACGCCAACGTCCTGATCAACGAGCGGATTCGCGAGGAACTGCGCAACGGATCGACGCCCCAGC TGGCGATCCACACTGGCTACGAGCGGGCGTTCGGTACTATTCTCGACTCCAATATCACGACGCTGATTGCCGGCATCGCC CTGCTGATTTTCGGCTCCGGTCCGGTGCGCGGTTTCGCTGTCGTACACTGTCTCGGGATTCTCACCTCCCTGTTCTCTGC GGTCGTCGTCTCGCGCGCGCTCATCAACCTGATCTATGGCAACCGTCGCAAGATCGAGTCGCTGGCCATCGGCCAGATCT GGAAACCCGGCAACACCGCCAATGTGGCAGCCAAATAG Protein sequence : MNRYPLWKYVLVAIALVLGLVYTLPNFFGESPAVQVSSAKATLKVDEKTRERVASTLRSASIENSGIFLDSNGVKVRLLN ADSQLQAKDLLEKQFNPDPTDPQYVVALNLLSSSPQWLTNLHALPMYLGLDLRGGVHFLLQVDMKGALTKRLDSISGDLR SLLRDKNVRHAGITREGERLTIRFRDGDTRAKARIVLEDNQSDLLLADQGEGDDLKLVATLKPEAIKRIQEFAVKQNMTT LSNRINELGVAEPVIAQQGADRIVVQLPGVQDTAKAKDILGRTATLEIRMVEETAGALEAAQAGQVPFGTELYVERGGLP LLVRKQVVLTGDRLTDAQPGFDNQTHEPAVHLTLDSAGARIFKDVTRDNVGKRMAIVLIEKGKGEVVTAPVIRAEIGGGR VQISGRMSTMEANDTALLLRAGSLAAPMEIIEERAIGPSLGAENIKKGFHSTMWGFAAIAVFMIAYYVLFGLVSVIALAA NLLFLVALLSLLQATLTLPGIAAIALALGMAIDANVLINERIREELRNGSTPQLAIHTGYERAFGTILDSNITTLIAGIA LLIFGSGPVRGFAVVHCLGILTSLFSAVVVSRALINLIYGNRRKIESLAIGQIWKPGNTANVAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-87 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-87 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 5e-87 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 5e-87 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 5e-87 | 43 |
