Gene Information

Name : psaA (LC705_00127)
Accession : YP_003172817.1
Strain : Lactobacillus rhamnosus Lc 705
Genome accession: NC_013199
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 140030 - 140734 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAATTTATCACGGTAAAAGATGAAACCAGACAATATGGCTCAGGTGAAAGTACTGTTTATGCCAATCATAATGT
TTCGTTTGAAATCAATTCAGGTGAGATCACCGTCATTTTAGGGGCTTCAGGTGCAGGCAAATCAACTTTGCTGAATATTC
TGGGCGGGATGGATAAAGCCACCAGTGGTCAGGTCACAGTGGCAGGTGAGAACATTTCTCAATATGATGCGCGGCAGTTG
ACAACATTTCGGCGCGAGCAGGTTGGGTTTGTCTTCCAATTCTACAACCTGGTACCGAACTTAACCGCACTGGAAAATGT
TGAACTAGCCAGCGAAATTGCGCCGGACGCATTAGATCCGCAAAAGACGTTGGTGGACGTCGGGTTGGGCAAAAGAATGA
ATAACTTCCCAGCTCAGCTTTCTGGTGGGGAACAACAGCGGGTGGCGATTGCGCGGGCGATTGCCAAGAACCCGTCACTG
TTATTGGCAGATGAGCCAACCGGGGCGCTGGATTATAAGACCGGGAAAAGCATTTTGAAACTTTTTGAAGACTTTTCCCA
CCAAACTGATAAGAATGTCATTATTGTGACGCATAACTCGTTGATTAAGCCCATGGCCGATCACGTCATTGAGATTCATG
ATGGCGAGGTCAAAGATGACTATCACAATGATCAGCCCACACCGGTCGAACAATTGAAATGGTAG

Protein sequence : 
MAKFITVKDETRQYGSGESTVYANHNVSFEINSGEITVILGASGAGKSTLLNILGGMDKATSGQVTVAGENISQYDARQL
TTFRREQVGFVFQFYNLVPNLTALENVELASEIAPDALDPQKTLVDVGLGKRMNNFPAQLSGGEQQRVAIARAIAKNPSL
LLADEPTGALDYKTGKSILKLFEDFSHQTDKNVIIVTHNSLIKPMADHVIEIHDGEVKDDYHNDQPTPVEQLKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
psaA YP_003172817.1 ABC transporter ATPase NC_012469.1.7685735. Protein 1e-64 59
psaA YP_003172817.1 ABC transporter ATPase NC_012469.1.7686878. Protein 2e-36 42
psaA YP_003172817.1 ABC transporter ATPase CP001581.1.gene598.p Protein 5e-36 42