Gene Information

Name : Hmuk_0060 (Hmuk_0060)
Accession : YP_003175918.1
Strain : Halomicrobium mukohataei DSM 12286
Genome accession: NC_013202
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 60000 - 60707 bp
Length : 708 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hma:rrnAC1029 ABC transporter ATP-binding protein

DNA sequence :
GTGACCGAATCCGTCCTCGTCGGATCCGACCTCGTGGTGACGCGGAGCGGGGAGCAGATCCTCGACGGCGTCTCGCTCAG
CGTCGCCTCGAACGCGACGGTCCTCGTCCAGGGGCCCAGCGGTGCCGGCAAGACGACGCTGTTCAACGTCCTCGGACTGC
TCGAAGCCCCCGAGAGCGGGACCCTCCACGTCGACGGTCGCGACGCGAGTGCCCTCTCGGAACGCGAGCGGGCGGCGCTC
CGGCGGTCGACGATCGGCTTCGTCTTCCAGGACTTCCAGCTGATCGGCGACCTCACTGCCCGCGAAAACGCCGCCCTCCC
ACAGGAACACGCCGGGGAACCCGATCCCGAATGGCTTGACACGCTGTTCGATCGGCTGGGCATCGCCGCTCTGGGGGGAC
AGTACCCCGCGACCCTCTCGGGCGGCGAAAAGCAGCGCGTCGCGATCGCCCGCGCACTGGCCAACAGGCCGGAGATCGTC
CTCGCAGACGAGCCCACCGGCCAGCTGGATCCGGCGACCGCAGACGCCGTCCTGGATCTGCTCTTCGGTATGCAGGCGTC
GGCCGAGACTGCACTGATCGTGATCAGTCACGACCCACAGCTCGCGCCACATTTCGACGAGCGGTTGCAACTCGCCGACG
GGCGACTTGTCGAACACGAGCACAACGACGAACAGCCACCGCAGACCCCGTCCTCGGAGACCAGCTGA

Protein sequence :
MTESVLVGSDLVVTRSGEQILDGVSLSVASNATVLVQGPSGAGKTTLFNVLGLLEAPESGTLHVDGRDASALSERERAAL
RRSTIGFVFQDFQLIGDLTARENAALPQEHAGEPDPEWLDTLFDRLGIAALGGQYPATLSGGEKQRVAIARALANRPEIV
LADEPTGQLDPATADAVLDLLFGMQASAETALIVISHDPQLAPHFDERLQLADGRLVEHEHNDEQPPQTPSSETS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hmuk_0060 YP_003175918.1 ABC transporter NC_008702.1.4606598. Protein 4e-26 42