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Name : Apar_1103 (Apar_1103) Accession : YP_003180122.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 1246233 - 1246745 bp Length : 513 bp Strand : - Note : PFAM: ribonuclease H; KEGG: pat:Patl_2365 ribonuclease H DNA sequence : ATGGAGGCAGCAACCTCATATATGCACGTCACAGTCTATACAGACGGTGCATCTAGAGGAAATCCTGGGCCTGGTGGCTA CGGGGCAGTGCTTTTGTATACCGATCCCTCTGGACAACAGCATACAAAAGAGTTTAGTCAAGGTTATAAAACTACTACAA ATAATCGCATGGAACTTCTTGGCGTAATTGTTGCTCTTGAAGCGCTCAAACGTCCTTGTCAAGTAGAGCTTTATTCAGAC TCAAAATATGTAGTTGATGCTTTTAATCAAAAATGGGTCTCGGGATGGGTTAGAAAAGGCTGGAAAACAGCATCTAAAGA GCCCGTCAAAAATGTAGACCTTTGGAAGCGTCTGCTTGCTGCCATGGAAGATCACGAGGTAAGCTTCAAGTGGGTCAAAG GCCACGCAGGCCATCCGCTTAACGAGCGCTGTGATCAGCTGGCAACTGAAGCTGCTGATGGCTCCAATCTTCTTGACGAT CAGGGTTTCTTCGCAGATCAGTCATTACTGTAA Protein sequence : MEAATSYMHVTVYTDGASRGNPGPGGYGAVLLYTDPSGQQHTKEFSQGYKTTTNNRMELLGVIVALEALKRPCQVELYSD SKYVVDAFNQKWVSGWVRKGWKTASKEPVKNVDLWKRLLAAMEDHEVSFKWVKGHAGHPLNERCDQLATEAADGSNLLDD QGFFADQSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-35 | 48 |
