Gene Information

Name : Aaci_0209 (Aaci_0209)
Accession : YP_003183661.1
Strain : Alicyclobacillus acidocaldarius DSM 446
Genome accession: NC_013205
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 224143 - 225630 bp
Length : 1488 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); nucleic acid binding OB- fold tRNA/helicase-type; KEGG: gsu:GSU2271 lysyl-tRNA synthetase

DNA sequence :
TTGGAAGAGCAAGAGCTGATTCAACATCGCCTGGAGAAGATGAACGCCCTGCGCGATCGCGGCATCGATCCGTTCGGCGG
CCGCTACGAGGTGACGCACCACGCGGCCGACATCCATCGCTTCGGCGAGGGGAAGGATCAAGCCGAACTCGAGCGCGAGA
ACCTTCGCGTGCGCATCGCCGGACGCCTGGTGGCGCGCCGCGGACACGGCAAGGCCACCTTCGCCGTGCTGAACGACGTC
ACGGGCAACATCCAGATCTACGCCAAGTACGACGTCCTCGGCCCCGAGGCGTACGATGTCTTCCAGCACCTCGTCGACCT
CGGCGACATCCTCGGCGTCGAGGGCACGGTCTTTCGCACCAACCGCGGCGAGATCACCGTGCTCGCTGAGCAGGTGACGT
TTCTCACCAAGTCCCTCCGCCCTCTGCCCGAGAAGTGGCACGGGCTGAAGGACGTCGAGACCCGCTATCGCCAGCGGTAC
CTCGATCTCATCGTCAATCCGGACGTGCGCCAGATCTTCATCGCCCGCTCCCGCATCATCCAGGAGATCCGCCGCTTCCT
GGACGGCCAGGGCTTCCTCGAGGTCGAGACGCCAACGCTCCACACCGTGGCGAGCGGCGCTCACGCGCGCCCGTTCATCA
CGCACCACAACGCGCTCGACATGGATCTGTACCTGCGCATCGCCATCGAGCTGCACCTGAAGCGGCTCATCGTCGGCGGC
CTCGAGCGCGTCTATGAGATCGGCCGCGTGTACCGGAACGAGGGCGTCTCGACGCGCCACAACCCCGAGTTCACCATGCT
CGAGCTGTATCAGGCGTACGCCGACTTCCACGACATCATGGATCTCACCGAGAACATGGTGCGCCACGCGGCCAAGGCCG
TGATCGGCAAACTGCACCTTCCCTACGGCGATCACGTCGTGGATCTCGAGTCGCCCTTCAAGCGCGCGCACATCGCCGAT
CTCGTCCTGGAGCACACGGGCGTCGACTTCCGCCGCGTGACGTCGGACGAGGAGGCGCGGCGCCTGGCCGCGGAGCATGG
CGTGAAGATTGAGCCGCACATGACGTATGGGCACATCCTGAACGAATTCTTTGAGCAGCGCGTCGAGGACAAGCTCATTC
AGCCGACGTTCGTGTACGGCCACCCAGTCGAGATCTCGCCGCTCGCCAAGAAGAATGCCGACGATCCCCGCTTCACCGAC
CGGTTCGAGCTGTTCATCGTCGGCCGCGAGCACGCGAACGCCTTCAGCGAGCTGAACGATCCCATCGATCAGCGCGAGCG
CTTCCTCGCGCAGCTGCGCGAGAAGGAGGCCGGCAACGAGGAGGCGCAGGCGCTCGACGAGGACTTCCTGACGGCGCTCG
AGCATGGCATGCCGCCCACGGGCGGGCTTGGCGTCGGGATCGACCGGTTGGTGATGCTGCTCACGGGCCAGCCGTCGATT
CGCGACGTCCTGCTCTTCCCGCTCATGCGCGAGCGGCAGGACGACTGA

Protein sequence :
MEEQELIQHRLEKMNALRDRGIDPFGGRYEVTHHAADIHRFGEGKDQAELERENLRVRIAGRLVARRGHGKATFAVLNDV
TGNIQIYAKYDVLGPEAYDVFQHLVDLGDILGVEGTVFRTNRGEITVLAEQVTFLTKSLRPLPEKWHGLKDVETRYRQRY
LDLIVNPDVRQIFIARSRIIQEIRRFLDGQGFLEVETPTLHTVASGAHARPFITHHNALDMDLYLRIAIELHLKRLIVGG
LERVYEIGRVYRNEGVSTRHNPEFTMLELYQAYADFHDIMDLTENMVRHAAKAVIGKLHLPYGDHVVDLESPFKRAHIAD
LVLEHTGVDFRRVTSDEEARRLAAEHGVKIEPHMTYGHILNEFFEQRVEDKLIQPTFVYGHPVEISPLAKKNADDPRFTD
RFELFIVGREHANAFSELNDPIDQRERFLAQLREKEAGNEEAQALDEDFLTALEHGMPPTGGLGVGIDRLVMLLTGQPSI
RDVLLFPLMRERQDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-111 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aaci_0209 YP_003183661.1 lysyl-tRNA synthetase VFG1668 Protein 8e-112 49