Gene Information

Name : Dtox_0255 (Dtox_0255)
Accession : YP_003189831.1
Strain : Desulfotomaculum acetoxidans DSM 771
Genome accession: NC_013216
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 279032 - 281464 bp
Length : 2433 bp
Strand : +
Note : PFAM: ATPase AAA-2 domain protein; UvrB/UvrC protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: bha:BH0103 class III stress response-related ATPase

DNA sequence :
ATGTTTGATAAATTTACGGAACGTGCTAAGAAAGTATTCGTGCTGGCACAAGACGAGGCCAAAAGGATGGCTACTCCATA
TATCGGTACGGAGCATTTGCTGCTTGGATTAATCCGTGAGGGTGAGGGTGTTGCTGCAAAAGTGTTGGAGTCACTTAATA
TTGATGCGGAAACAGTTCGCCAAGCGGTAGGGCAGCTTGTCGGTCCAGGCAAAGGTGTAGCTCAGGAAATGTTTCTGACA
CCTCGCGGCAAAAAAGTTCTTGAACTGGCTATAGCTGAAGCCAGGAGTTTAGGACATAATTATGTTGGCACCGAACATCT
TTTGCTGGGATTAATCAGCGAGGGCGAAGGAGTGGCAGCACAGGTATTAAACGCCTTGGGTGCTGATATTGAACAGGTAC
GCAGTATGATTATGCAGATGTTGGGTGGAGGGCAGTCGTCGCAGGGTGGCTGCGCTTCCGGCCAGTGCGGCAGCAAAGCT
GGGAATGTTCAGACAAAGGCCCTGGATGAGTACGGTCGTGATTTGACAGAAATGGCTCGCGAAGATAAGCTTGACCCTGT
AGTCGGAAGAGAAAAAGAAATTGAGAGAGTTATACAGGTATTAAGCCGCAGAACTAAAAATAACCCTGTTTTGCTTGGTG
ATCCGGGAGTAGGGAAAACCGCTGTTGTAGAGGGTTTAGCCCAGCGGATATCTTCCGGCAACGTTCCTGAGACGCTGCTC
TCAAAAAGGGTCGTTAGTTTGGATTTAGCTGCTCTGGTTGCCGGCACCAAGTACAGGGGAGAATTTGAAGACCGTTTAAA
AAAAGTGACACAAGAAATTACTAAAGCGGGCAACATAGTACTGTTTATTGATGAGCTGCATACTTTGATAGGTGCCGGTG
CCGCAGAAGGTGCCATAGACGCGGCAAATATATTAAAACCCGCTTTAGCACGGGGCGAAATGCAATGCATTGGAGCTACA
ACATTGGATGAGTATCGCAAGTATATAGAAAAAGATGCGGCACTGGAACGGCGTTTCCAACCAATTAATGTTGAAGAGGC
AACGGTGGAAGAAACCATTGCTATTCTTAAGGGATTAAGAGATAGGTATGAAGCCCATCACCGTGTTCGTATCAGTGATG
AGGCTCTGGTTAATGCAGCTAAGCTGGCTGACCGCTATATATCAGATCGGTTTTTGCCGGATAAGGCCATAGATTTAATG
GACGAAGCAAGTTCCAGAGTTCGTATGCTGGCTTTTACTGCACCACCGGACTTAAAAGATCTGGAGCGTAAAACGGAAAA
GGTGCGGAAGGAGAAAGAAGAGGCTATTAACAGCCAGGAATTTGAAAAAGCGGCCCGGCTAAGGGATCAGGAGCAGTCCC
TGAAGAAGGAACTGGAAGACCGCCGGGAAGCCTGGAATCTAACAAAAGGCGGCAATGAACTGGCTGTCAGTGAAGAAGAT
ATTGCTCATGTTGTAGCTTCTTGGACAGGTATACCTGTTAAAAAGCTGGCCGAAGAAGAGTCGGATAGACTTTTGAAAAT
GGAAGAAATACTGCATCAAAGGGTAATCGGTCAGGAGGAAGCTGTTCGGGCAGTTTCCCGTGCTGTACGCCGTGCACGGG
CAGGCCTAAAAGATCCTGGCCGTCCTGTAGGCTCCTTTATTTTCCTGGGTCCTACCGGGGTGGGCAAAACTGAGTTAGCC
AGAGCACTGGCCGAAGCTCTTTTTGGCGATGATGATGCCTTGATTCGCATAGATATGTCTGAATACATGGAGAAGTATGC
GGTATCCAGGCTGGTTGGCGCTCCCCCAGGCTATGTAGGGTATGAAGAGGGAGGTCAACTGACCAAGGCGGTTAGGAGGA
AGCCTTATTCAGTAGTATTGCTGGATGAAATAGAGAAGGCGCATCCGGATGTTTTTAACATTCTCCTACAAGTTCTGGAA
GATGGGCGGCTTACTGATTCTCAGGGTCGTGCGGTGGATTTCCGCAATACTGTTATTATTATGACTTCTAATGTCGGAGT
AAGTCATATAAGAAAGATTGGCTCGCTTGGTTTTCAAACCGCCGAAAATGACAGCTATAGTAAAATGAAGGGCGATGTTA
CCCAGGAATTGCGTAAAACTTTTCGGCCGGAATTTCTCAATAGGGTGGATGAGACTATTGTGTTCCACTCCTTAGAGCAG
AAACATCTAAATGAAATTGTCGGTCTGATGCTAAAAGATGTGCTTGGCCGATTGGCGGAAAACGAAATCAAAGTGGAAGC
GACGGAAGCAGCTAAAGAACTCTTAGCCAGTAAGGGCTTTGATGAAACATATGGTGCCCGCCCCCTGCGCCGTGAGATTC
AAAAACAGGTTGAGGATAGACTATCCGAAGAATTATTAAAAGGAGCGGTTAAAAAAGGAGAACATGTTGTACTCAATGTG
GTGGATGGCGAGATTTTAATTGAGAAAAAATAA

Protein sequence :
MFDKFTERAKKVFVLAQDEAKRMATPYIGTEHLLLGLIREGEGVAAKVLESLNIDAETVRQAVGQLVGPGKGVAQEMFLT
PRGKKVLELAIAEARSLGHNYVGTEHLLLGLISEGEGVAAQVLNALGADIEQVRSMIMQMLGGGQSSQGGCASGQCGSKA
GNVQTKALDEYGRDLTEMAREDKLDPVVGREKEIERVIQVLSRRTKNNPVLLGDPGVGKTAVVEGLAQRISSGNVPETLL
SKRVVSLDLAALVAGTKYRGEFEDRLKKVTQEITKAGNIVLFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCIGAT
TLDEYRKYIEKDAALERRFQPINVEEATVEETIAILKGLRDRYEAHHRVRISDEALVNAAKLADRYISDRFLPDKAIDLM
DEASSRVRMLAFTAPPDLKDLERKTEKVRKEKEEAINSQEFEKAARLRDQEQSLKKELEDRREAWNLTKGGNELAVSEED
IAHVVASWTGIPVKKLAEEESDRLLKMEEILHQRVIGQEEAVRAVSRAVRRARAGLKDPGRPVGSFIFLGPTGVGKTELA
RALAEALFGDDDALIRIDMSEYMEKYAVSRLVGAPPGYVGYEEGGQLTKAVRRKPYSVVLLDEIEKAHPDVFNILLQVLE
DGRLTDSQGRAVDFRNTVIIMTSNVGVSHIRKIGSLGFQTAENDSYSKMKGDVTQELRKTFRPEFLNRVDETIVFHSLEQ
KHLNEIVGLMLKDVLGRLAENEIKVEATEAAKELLASKGFDETYGARPLRREIQKQVEDRLSEELLKGAVKKGEHVVLNV
VDGEILIEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-85 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtox_0255 YP_003189831.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 65
Dtox_0255 YP_003189831.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 1e-145 53