|
Name : Dret_0100 (Dret_0100) Accession : YP_003196980.1 Strain : Desulfohalobium retbaense DSM 5692 Genome accession: NC_013223 Putative virulence/resistance : Unknown Product : cysteine desulfurase NifS Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 135040 - 136242 bp Length : 1203 bp Strand : - Note : TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dvm:DvMF_2659 cysteine desulfurase NifS DNA sequence : ATGAACCCGGTATATTTAGACAACAACGCCACCACCAGAGTGGCCCCTGAAGTCGAGGAGGCCATGCGGCCCTACCTAGG GGAGTTGTACGGCAATCCCTCGAGCATGCACCGCTTTGGCGGACAGGTGGGCAAGGATTTGCGTATCGCCCGCGAACAGG TCGCAACAGGCCTCGGCGCCGATCCGGAAGAAATCATTTTCACCTCCTGCGGCACGGAAGGGGACAACACGGCCATCCAT GCCGCCTTGGAAAGTCAGCCCGACAAGCGCCACATCGTGACCACCAAAGTCGAACATCCGGCCGTGCTCAATTATTGCAA GCACCTGGAAAAAAAGGGGTACGAGGTCACGTATCTCGGCGTCGACACCCACGGCCGCCTCGACCTCAATGCGTTGAAAA ACAGTCTGCGCCCGGATACGGCCATTGTCTCCATCATGTACGCCAACAATGAAACCGGGGTCATTTTTCCGCTGGACGAG ATCGCCCCGCTGGTCAAGGAACGGGGCATTCTCCTGCATACCGATGCCGTGCAGACCCTGGGCAAGATCCCTTTTTCAGT CGCCGATCTGCCGGTGGATTATCTCGTTGTCTCCGGCCACAAAGTGCACGGGCCCAAGGGCGTCGGCGTCTTGTACGTGC GCCGCTCCGCCCCCTATGCTCCTTTTGTCATTGGCGGGCACCAGGAGCACGGTCGGCGGGCCGGAACGGAAAACACGGCC TCGATCATCGCCATGGGCAAGGCGGTCGAGTTGGCCACCACGGATATCGCCGCGGAACAAAGCCGGATCAGCGCCCTGCG CGACCGGCTCCAGAGCGGTTTGCTGGAGGCGATCCCGGACACCGTGGTCAACGGCGAGGCCGCAGAGCGCCTGCCGAACA CCCTGTCCATCGCCTTCAAATATATTGAAGGCGAGGCCATGCTCCTGCTGCTCGACGAGTTCGCCATCTGCGCGAGTTCC GGATCGGCCTGCACCTCAGGCAGCCTGGAGCCCTCCCATGTCCTGCGGGCCATGGGGGTTCCGTTCACATATGCCCACGG CTCACTGCGCTTTTCCCTTTCGCGGTACACCACCGAGGAGGAGATCGACACCGTCCTGCGCGAACTTCCGCCGATCATCG AACGCTTGCGGGCCATGTCCCCCTTTCGGCGCGGAGAAGAGGCTTTCGGAGTCTCCTGTGGTATCGAGCGGGACACGGTG TAG Protein sequence : MNPVYLDNNATTRVAPEVEEAMRPYLGELYGNPSSMHRFGGQVGKDLRIAREQVATGLGADPEEIIFTSCGTEGDNTAIH AALESQPDKRHIVTTKVEHPAVLNYCKHLEKKGYEVTYLGVDTHGRLDLNALKNSLRPDTAIVSIMYANNETGVIFPLDE IAPLVKERGILLHTDAVQTLGKIPFSVADLPVDYLVVSGHKVHGPKGVGVLYVRRSAPYAPFVIGGHQEHGRRAGTENTA SIIAMGKAVELATTDIAAEQSRISALRDRLQSGLLEAIPDTVVNGEAAERLPNTLSIAFKYIEGEAMLLLLDEFAICASS GSACTSGSLEPSHVLRAMGVPFTYAHGSLRFSLSRYTTEEEIDTVLRELPPIIERLRAMSPFRRGEEAFGVSCGIERDTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-53 | 43 |
