Gene Information

Name : Dret_0331 (Dret_0331)
Accession : YP_003197211.1
Strain : Desulfohalobium retbaense DSM 5692
Genome accession: NC_013223
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 414405 - 416594 bp
Length : 2190 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA

DNA sequence :
ATGACGGAGTATGTCCGTAGTGGAGGACTCCAGGTAGCGGCGCCGTTGGCCGAGCTGGTGGCTCAGGAGGTGACGCCCGG
AATCGGCGTAGATCCGGAGAAGTTCTGGACCGCTCTCGCCCAGGCTGTGCGCGATTTCGCTCCGCGCAATGCGGCTTTGT
TGAAAGAGCGGGACCGGCTGCAGGAGCAGATAGACCAGTGGTTCCAAGACCGTCGCGGTCAAGCGCATGATGCTGCGGCG
CACAAGAAGTTTTTATACGATATCGGCTATTTGATTCCCGAGGGCGAGGATTTTTCCATTCGGACTTCTGATGTGGATCC
GGAGATTTCGGCTGTGGCGGGGCCGCAATTGGTCGTGCCTGTCAATAACCCCCGGTATGCGCTCAACGCCGCCAATTCCC
GCTGGGGCAGCCTCTACGACGCCCTCTACGGTACAGATGTCCTGCCGGAAACCGACGGAGCGGAGAAGACCGCAGAATAC
AACCCGGTCCGCGGCGAAAAGGTCGTCGAACACGCCGCCCGTTTTCTGGATCAGGCCGTCCCCCTGGCCCAGGGCTCCTA
CACCGGTGTGACCGGATATGCCGTCCGCCACGATGACGGCGTAGCCCGCTTAGAAGTGGCCCTTGACGATGGATCTGTCA
CCGGATTGCGCGACGGACAGCAATTTGTGGGCTATGTGGGGGAGGACCGGTTGTCAGCCGTTCTCTTTCGCCATAACGGG
CTGCACATTGAGATCCAGATCGATCCCGAGGACCCCATCGGGCGCAATCACCCGGCCGGGGTCAAGGATGTGGTGGTCGA
GGCGGCCATGACCACCATTCTCGATTGCGAGGATTCGGTGACCGCCGTGGATGGTGTGGACAAGACAGTCGCCTACCGCA
ATTTGCTGGGCCTTTTTCGAGGGGACCTGGAGACCTCGTTTTCCAAGGGCGGGCAAACCGTTGAGCGGCGGCTCCACCCG
GACCGCAGCTACACCTCGCCTGAGGGACGCCTTTTCCATCTCCACGGCCGGAGTCTGATGCTCGTACGCACTGTCGGGCA
TCTCATGACTTCGGACGCCGTGCTGGACGAAGAGGGGCGGCAGATCCCCGAAGGTATCCTCGATACCTTCATGACCGCGC
TTATCGGATTGCATGATCTGAAAAAGACCGGCCCGTTCCAGAACAGCCGTAGCGGCAGCCTGTATATCGTCAAACCCAAA
ATGCACGGTCCGGAGGAAGTGGCCTTCACCTGCGAGCTGTTCGCGGCGGCGGAAGAATCCCTGGGCCTGCCCAGCCGGAC
CTTGAAAGTCGGGGTCATGGACGAAGAGCGGCGGACCACGCTCAACCTCAAAGAATGCATCCGTCAGGCCCAGGACCGGA
TTATTTTTATCAATACCGGGTTTCTGGACCGCACCGGCGACGAGATCCATACGAATATGGAAGCCGGCCCTATGGTGCGC
AAGAACGAGATGAAGCAGGAACCCTGGATGCAGGCCTATGAGGACTGGAACGTCGATGTCGGATTGGCCGCCGGGTTCCG
CGGACGGGCCCAGATCGGCAAGGGCATGTGGCCCAAGCCGAACAAGATGCGGGAGATGCTCGAGACCAAACAGGTCCATC
CCGAGGCGGGCGCCAATTGCGCCTGGGTGCCCTCGCCCACGGCAGCGACTCTGCACGCCCTGCACTACCACCAAGTGGAG
GTGAACGCCCGGCAGGTCGCCCTCGAAGGGCAGCGGCGGGCTTCGCTGGATGATTTGTTGACCATTCCGGTGCTGCGGTC
TGCGGCTCCGTCGGAGGCGGAGATCCAGCAGGAGTTGGAAAACAATGCCCAGAGCATCCTGGGCTATGTCGTGCGCTGGG
TGGAACAGGGCATCGGCTGTTCGACGGTGCCGGATATCAACGATATCGGGTTGATGGAAGATCGGGCGACTTTGCGCATT
TCCAGTCAGCATATCGCCAACTGGCTCTATCACGGGATATGCAGCAAGGACGAGGTCCTGGCGGTGCTCAAACGCATGGC
GGCTGTGGTCGATCGCCAGAACAGCGGGGATCCGTTCTACCGTCCCATGGCCGAGGACTTTGACAATAGCGTGGCCTTTC
AGGCGGCGTGTGATCTGGTATTCAAAGGGTGTGAACAGCCCAATGGGTATACCGAACCCATTTTGCACGCCCGTCGCCGG
GAAGCGAAAGCGAAATTCGGGATTGAGTGA

Protein sequence :
MTEYVRSGGLQVAAPLAELVAQEVTPGIGVDPEKFWTALAQAVRDFAPRNAALLKERDRLQEQIDQWFQDRRGQAHDAAA
HKKFLYDIGYLIPEGEDFSIRTSDVDPEISAVAGPQLVVPVNNPRYALNAANSRWGSLYDALYGTDVLPETDGAEKTAEY
NPVRGEKVVEHAARFLDQAVPLAQGSYTGVTGYAVRHDDGVARLEVALDDGSVTGLRDGQQFVGYVGEDRLSAVLFRHNG
LHIEIQIDPEDPIGRNHPAGVKDVVVEAAMTTILDCEDSVTAVDGVDKTVAYRNLLGLFRGDLETSFSKGGQTVERRLHP
DRSYTSPEGRLFHLHGRSLMLVRTVGHLMTSDAVLDEEGRQIPEGILDTFMTALIGLHDLKKTGPFQNSRSGSLYIVKPK
MHGPEEVAFTCELFAAAEESLGLPSRTLKVGVMDEERRTTLNLKECIRQAQDRIIFINTGFLDRTGDEIHTNMEAGPMVR
KNEMKQEPWMQAYEDWNVDVGLAAGFRGRAQIGKGMWPKPNKMREMLETKQVHPEAGANCAWVPSPTAATLHALHYHQVE
VNARQVALEGQRRASLDDLLTIPVLRSAAPSEAEIQQELENNAQSILGYVVRWVEQGIGCSTVPDINDIGLMEDRATLRI
SSQHIANWLYHGICSKDEVLAVLKRMAAVVDRQNSGDPFYRPMAEDFDNSVAFQAACDLVFKGCEQPNGYTEPILHARRR
EAKAKFGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 56