Gene Information

Name : Namu_2338 (Namu_2338)
Accession : YP_003201703.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2578883 - 2579188 bp
Length : 306 bp
Strand : +
Note : PFAM: microcompartments protein; KEGG: kpe:KPK_0905 propanediol utilization protein PduJ

DNA sequence : 
ATGACCGAATCCGCCGGGCCGACCGGTGCGCTGGGCCTGATCGAGACCAAGGGCCTGGTCGGCGCGATCGAGGCGGCCGA
CGCCATGGTCAAGGCGGCCAATGTCCAGGTGCAGGGGTACCGGACCCTGCGCAACGGGCAGGTGTCGGTGCTGGTCCGCG
GCGACGTCGGGGCGGTGAAGGCGGCGGTGGATGCCGGGCGGGCCGCGGCGGCCCGGGTCGGCGAGCTGTACAGCAGCCAC
ATCATCGCCCGCCCGCATTCGGAGACCGACGAGGTCGTCGGGCAGGCGGTCACCCCGACCGGCTGA

Protein sequence : 
MTESAGPTGALGLIETKGLVGAIEAADAMVKAANVQVQGYRTLRNGQVSVLVRGDVGAVKAAVDAGRAAAARVGELYSSH
IIARPHSETDEVVGQAVTPTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-09 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-09 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-09 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_2338 YP_003201703.1 microcompartments protein VFG1596 Protein 5e-10 60
Namu_2338 YP_003201703.1 microcompartments protein VFG1597 Protein 2e-09 60
Namu_2338 YP_003201703.1 microcompartments protein VFG1598 Protein 4e-09 58