Gene Information

Name : Namu_2345 (Namu_2345)
Accession : YP_003201710.1
Strain : Nakamurella multipartita DSM 44233
Genome accession: NC_013235
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2586811 - 2587131 bp
Length : 321 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: mpt:Mpe_B0501 carboxysome structural- like protein

DNA sequence : 
ATGGCCACCACGGGCACGCCCGGCACCCTCGGGCCACGCGGCGCGCTGGGCCTGATCGAGACCAAAGGCCTGGTCGGCGC
GATCGAGGCGGCGGACGCCATGGTCAAGGCGGCCAACGTGCAGATCGTCGGCCACCGGGAGATCGGCGGCGGCCTGGTCA
CCGTCATGGTCCGCGGCGACGTCGGTGCGGTGAAGGCGGCGACCGATGCCGGCGCGGTGGCCGCCGGCAAGGCCGGCGAG
GTGGTGTCCGTGCACGTGATCCCACGGCCGCACGAGGAGACCGAAGGCATCCTGGCCATCCTCACCCGGCCGAAGGGCTG
A

Protein sequence : 
MATTGTPGTLGPRGALGLIETKGLVGAIEAADAMVKAANVQIVGHREIGGGLVTVMVRGDVGAVKAATDAGAVAAGKAGE
VVSVHVIPRPHEETEGILAILTRPKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-09 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Namu_2345 YP_003201710.1 microcompartments protein VFG1596 Protein 2e-09 64
Namu_2345 YP_003201710.1 microcompartments protein VFG1597 Protein 5e-09 61
Namu_2345 YP_003201710.1 microcompartments protein VFG1598 Protein 9e-09 60