Gene Information

Name : DAMO_2087 (DAMO_2087)
Accession : YP_003206968.1
Strain : Candidatus Methylomirabilis oxyfera
Genome accession: NC_013260
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT)
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.21
Position : 1806594 - 1807652 bp
Length : 1059 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12196148, 8206834; Product type e : enzyme

DNA sequence :
ATGAGCACATTGACTGAGATCTGTTCCCGCATCAAAGAGCCGGATCAGCGGATTGCGGAGAGAACGCAACGACTGTTGGA
CCTCAAAACCAAACCGCGGAGGAGTCTCGGTCGACTCGAGGACCTTGCCTGCCAAGTAGCGGCGATTCGCGGCACGAGCG
TACCCGATCTTCCTCAGAAGGCTATTGTGGTCATGGCGGCTGACCACGGCGTGGCCGAGGAGGGCGTCAGCGCCTATCCG
CAAGAGGTCACCGGCCAGATGCTGCTCAACTTCGCGCGCGGCGGCGCGGCGATCAACGTGTTGGCGCGACATGCCGGCGC
CAGGGTCGTGATCGTGGATATGGGCGTGAAGGCGCCGCTGTGCGCGGCGTCGGGAGTTCGGGCGCACCGAATCGGGTCCG
GTACGCGCAACTTTACAAGAGGGCCGGCGATGACACGGGAAGAGGTCATCACGGCCGTCGAAGTCGGCATTCAGATTGCC
GGGGAATTGGCGCGTGACGGGGTGACCCTTCTGGGCATCGGCGATATGGGTATCGGCAATACGACCGCCGCGAGCGCCCT
GACCGCGGTGTTCACAGGAGTGCCTCCGGAAGACGTAGCGGACCGAGGGACCGGTATTGACGATGTGGCCCTCAAACAGA
AGATTGACGCCATTCGGCGCGGGCTCTTGCTCAACCGTCCTGATCCACAGGATGGCGTCGATGCCCTGGCTAAGGTAGGG
GGATTCGAGATCGCCGGACTCGCCGGCGTCATCTTGGGCGGAGCGGCGTCTCGGATGGCAATAGTGATCGACGGATTCAT
CTGCGGCAGCGCGGCGCTCGCCGCGACGCGAATCGCGCCGCGTGCGGCAGGGCACCTCATTGCCTCGCACCGCTCTGCGG
AGGCAGGGCACCGGCTGGTGCTCCAGGCGCTCGGCACCACACCCCTGCTCGATCTGGACCTACGTTTAGGTGAAGGCACC
GGCGCGGTGCTGGCCATGAATCTTGTCGAGGCAGCGCTGCACATCCTTCGCGAGATGGCGACATTCACCTCGGCGGGGGT
GAACGATAGTGGCGTTTAG

Protein sequence :
MSTLTEICSRIKEPDQRIAERTQRLLDLKTKPRRSLGRLEDLACQVAAIRGTSVPDLPQKAIVVMAADHGVAEEGVSAYP
QEVTGQMLLNFARGGAAINVLARHAGARVVIVDMGVKAPLCAASGVRAHRIGSGTRNFTRGPAMTREEVITAVEVGIQIA
GELARDGVTLLGIGDMGIGNTTAASALTAVFTGVPPEDVADRGTGIDDVALKQKIDAIRRGLLLNRPDPQDGVDALAKVG
GFEIAGLAGVILGGAASRMAIVIDGFICGSAALAATRIAPRAAGHLIASHRSAEAGHRLVLQALGTTPLLDLDLRLGEGT
GAVLAMNLVEAALHILREMATFTSAGVNDSGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cobT YP_853092.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Not tested PAI IV APEC-O1 Protein 3e-48 43