Name : DAMO_2087 (DAMO_2087) Accession : YP_003206968.1 Strain : Candidatus Methylomirabilis oxyfera Genome accession: NC_013260 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (anaerobic pathway of cobalamin biosynthesis, cobT) Function : - COG functional category : - COG ID : - EC number : 2.4.2.21 Position : 1806594 - 1807652 bp Length : 1059 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12196148, 8206834; Product type e : enzyme DNA sequence : ATGAGCACATTGACTGAGATCTGTTCCCGCATCAAAGAGCCGGATCAGCGGATTGCGGAGAGAACGCAACGACTGTTGGA CCTCAAAACCAAACCGCGGAGGAGTCTCGGTCGACTCGAGGACCTTGCCTGCCAAGTAGCGGCGATTCGCGGCACGAGCG TACCCGATCTTCCTCAGAAGGCTATTGTGGTCATGGCGGCTGACCACGGCGTGGCCGAGGAGGGCGTCAGCGCCTATCCG CAAGAGGTCACCGGCCAGATGCTGCTCAACTTCGCGCGCGGCGGCGCGGCGATCAACGTGTTGGCGCGACATGCCGGCGC CAGGGTCGTGATCGTGGATATGGGCGTGAAGGCGCCGCTGTGCGCGGCGTCGGGAGTTCGGGCGCACCGAATCGGGTCCG GTACGCGCAACTTTACAAGAGGGCCGGCGATGACACGGGAAGAGGTCATCACGGCCGTCGAAGTCGGCATTCAGATTGCC GGGGAATTGGCGCGTGACGGGGTGACCCTTCTGGGCATCGGCGATATGGGTATCGGCAATACGACCGCCGCGAGCGCCCT GACCGCGGTGTTCACAGGAGTGCCTCCGGAAGACGTAGCGGACCGAGGGACCGGTATTGACGATGTGGCCCTCAAACAGA AGATTGACGCCATTCGGCGCGGGCTCTTGCTCAACCGTCCTGATCCACAGGATGGCGTCGATGCCCTGGCTAAGGTAGGG GGATTCGAGATCGCCGGACTCGCCGGCGTCATCTTGGGCGGAGCGGCGTCTCGGATGGCAATAGTGATCGACGGATTCAT CTGCGGCAGCGCGGCGCTCGCCGCGACGCGAATCGCGCCGCGTGCGGCAGGGCACCTCATTGCCTCGCACCGCTCTGCGG AGGCAGGGCACCGGCTGGTGCTCCAGGCGCTCGGCACCACACCCCTGCTCGATCTGGACCTACGTTTAGGTGAAGGCACC GGCGCGGTGCTGGCCATGAATCTTGTCGAGGCAGCGCTGCACATCCTTCGCGAGATGGCGACATTCACCTCGGCGGGGGT GAACGATAGTGGCGTTTAG Protein sequence : MSTLTEICSRIKEPDQRIAERTQRLLDLKTKPRRSLGRLEDLACQVAAIRGTSVPDLPQKAIVVMAADHGVAEEGVSAYP QEVTGQMLLNFARGGAAINVLARHAGARVVIVDMGVKAPLCAASGVRAHRIGSGTRNFTRGPAMTREEVITAVEVGIQIA GELARDGVTLLGIGDMGIGNTTAASALTAVFTGVPPEDVADRGTGIDDVALKQKIDAIRRGLLLNRPDPQDGVDALAKVG GFEIAGLAGVILGGAASRMAIVIDGFICGSAALAATRIAPRAAGHLIASHRSAEAGHRLVLQALGTTPLLDLDLRLGEGT GAVLAMNLVEAALHILREMATFTSAGVNDSGV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-48 | 43 |