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Name : glcD (DAMO_3171) Accession : YP_003208041.1 Strain : Candidatus Methylomirabilis oxyfera Genome accession: NC_013260 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : - COG ID : - EC number : 1.1.3.15 Position : 2748033 - 2749490 bp Length : 1458 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183, 9880556; Product type e : enzyme DNA sequence : ATGGAGAAACCAAGGATCGTCAAAGAGCTGGCGGCTATTGTAGGCCCGGAGTGGGTGATCTCCGATCCGGATGAGTTGAC CGTATACGAGTGTGACGGGATGACCTATCTGGAGAAGGCCATGCCCGATGTTGTGGTCCTTCCGGATAATACAGAGCAGG TCGTCGCGGTTGTAAAGCTTTGTGGCAGGGAGCAGCTTCCCTTTCTGCCGCGTGGAGCGGGAACCGGGCTGTCTGGCGGC GCTATTGCCGTTTCCGGCGGGGTGATCATCGGACTGAATCGCATGAATCGGATATTGGAGATTGATATCCCGAATCAGCG GGCTATCGTAGAGCCGGGCCTGGTGAACCTCGCCCTGACCCAGGCGGTTCAGGATCACAGCCACTATTTTGCCCCGGACC CGGCTAGCCAGGCCGCCTCCAGTATCGGCGGCAATGTGGCCGAGAACGCCGGAGGACCCCACTGCCTGAAGTACGGGACT ACGACAACGCATATCCTCGGGCTCGAGGTGGTCCTGGCATCGGGGGAGATTGTCCAGGTCGGCGGCAAGACGCTGGACTG CCCAGGCTACGACCTAACCGGCCTGTTCGCCGGCTCTGAAGGGACCTTGGGGATCGCCACGAAGGTGACCGTTCGCCTCC TCCGCCAGGCCGAGGCCGTGAAGACCCTGCTGGCCTCCTTCCGCACCATCGACGCGGCGAGCGAGGTGGTATCGGAGATC ATTGCTGCCGGCATCATCCCTGCCGCCCTGGAGATGATGGATCGACACATCATCAGGGCGCTTGAAGAGTGGTTGCATAT CGGTTACCCTGAAGGCGCCGGCGCGGTGCTGCTGATAGAACTGGATGGGCCGGCCGCAGAGATCGAGGCCCAGACGAAGC AGATTACGCAGATTTGTAACCGGTGCGGCGCCCTGGACCTGCGGATCGCCATGGATGAACAGGAGCGGGCTTTGCTCTGG AGGGGACGGAAGGGCGCGGTTGCGGCCGTGGGCCGGATCACCCACGAATTTTACCTGCAGGATGGCGTCGTCCCGAGGAC TACACTTCCGCGGGTGCTCAGGGAGGTCGAGGCGATCGCGGAGCGCCATGCCTGCGTGATTGCGAATGTATTCCACGCGG GTGACGGGAACCTCCATCCCCTGATCTGTTTCGACTCTCGCAGGGAAGGGGAGTTGCAGAGGGCCTTTGCAGCCGGGGCG GAGATCATGAGGCTCTGTCTCTCGGTCGGCGGCAGCATCACGGGGGAGCATGGGATCGGGATGGAGAAGATCGACTTCAT TCCCCTCATGTACAGCCCCGACGACCTTGAGGCAATGCGGAGGGTTCGTGCGGCATTCGACAGCTCTTCACGGTGCAACC CCGGCAAGCTCTTGCCCTCCAGCAGGTCCTGCGGTGAAACCAACATCTCCTATCGACTGCACCGTATTGAACGGGAGGGC CTCGCCCAGCGTATCTGA Protein sequence : MEKPRIVKELAAIVGPEWVISDPDELTVYECDGMTYLEKAMPDVVVLPDNTEQVVAVVKLCGREQLPFLPRGAGTGLSGG AIAVSGGVIIGLNRMNRILEIDIPNQRAIVEPGLVNLALTQAVQDHSHYFAPDPASQAASSIGGNVAENAGGPHCLKYGT TTTHILGLEVVLASGEIVQVGGKTLDCPGYDLTGLFAGSEGTLGIATKVTVRLLRQAEAVKTLLASFRTIDAASEVVSEI IAAGIIPAALEMMDRHIIRALEEWLHIGYPEGAGAVLLIELDGPAAEIEAQTKQITQICNRCGALDLRIAMDEQERALLW RGRKGAVAAVGRITHEFYLQDGVVPRTTLPRVLREVEAIAERHACVIANVFHAGDGNLHPLICFDSRREGELQRAFAAGA EIMRLCLSVGGSITGEHGIGMEKIDFIPLMYSPDDLEAMRRVRAAFDSSSRCNPGKLLPSSRSCGETNISYRLHRIEREG LAQRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-92 | 47 |
