Gene Information

Name : CTU_12160 (CTU_12160)
Accession : YP_003209579.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1275122 - 1276624 bp
Length : 1503 bp
Strand : +
Note : -

DNA sequence :
ATGTCTATGAGTCAAACACAGCAATCCCACAACGCCGCTGCGTCTGCCGTTGAAATCGATGATTTTAATGCGCTGCTTGC
AAGAGAATTTAAACCACGTTCGGATCAGACTCGCTCTGCCGTTGAAGGGGCCGTCAAAACGCTGGCGGAGCAGGCGCTGG
TTAATGCCGTCACGCTATCTGATGATGCCTACAAGTGCATTGCATCAATCATTGCGGAAATTGACAGAAAACTCTCTGAG
CAAATCAACCTTATTTTACATCACGACGAGTTTCAGACGCTGGAGAGCGCCTGGCGTGGCCTGCATTATCTGGTCACCCA
TACTGAAACAGACGAAAAGTTAAAGTTACGCTTTCTGGATATTTCCAAAACCGACCTGCGCCGTACGATGAAACGCTATA
AAGGCGTCGCATGGGATCAGAGCCCGCTATTTAAAAAAGTCTATGAAGAAGAGTACGGGCAGTTGGGCGGCGAGCCCTAC
GGCTGTCTGGTTGCCGATTATTATTTCGATCACAGCGCGCCTGATGTCGATCTCCTGGCCTCGCTCGCTAAAGTGGCGGC
CTCTGCGCATGTTCCCTTTATTACCGGCGCTTCGCCATCCGTGCTGCAGATGGAATCCTGGCAGGAGCTTTCCAACCCTC
GCGATCTGACAAAAATCTTCACGCAGAATCTTGAGTATGCGGCCTGGAATTCACTGCGCCTGGCGGAAGATTCTCGCTAT
ATCGGTCTTGCCATGCCGCGTTTCCTGGCCCGTTTGCCCTACGGCATTCGCACCAATCCGGTTGACGAGTTTCATTTTGA
AGAAACGACTGACGGCGCAGACCATTCAAAATATGTCTGGTCAAATGCCGCCTATGCGATGGCTGTTAATATCAACCGTT
CCTTTAAAGAATATGGCTGGTGTACGCTCATTCGCGGCGTTGAAAGCGGCGGTGTCGTGGAAGGGTTGCCGTGCCATACC
TTCCCGACAGACGATGGCGGCATTGACATGAAGTGCCCGACGGAAATTGCTATATCTGATCGTCGCGAAGCTGAGCTCGC
CAAAAATGGTTTTATTCCGCTCGTGCATCGTAAAAATACGGATTATGCCGCTTTTATTGGCGCACAGTCTTTGCAAAAAC
CTGCTGAATATTATGATGCAGACGCTACTGCCAATGCGAATTTATCGGCGCGTTTACCCTATATGTTCGCCTGCTCGCGT
TTTGCGCATTATTTGAAATGTATCGTTCGCGATAAAATCGGTACTTTTAAAGAGCGCGACGATATGCAGCGCTGGCTGAA
TGACTGGATCATGAATTATGTCGACGCCGATCCCACTAACTCATCGTTAGAAACGAAATCGCGCCGTCCGCTCGCCGCCG
CGGAAGTTATTGTGGAGGATGTGGAAGGAAATCCGGGTTATTACCAGGCGAAATTCTTTTTACGTCCTCATTTCCAGCTT
GAAGGCTTAACGGTGTCATTACGCATGGTCGCGAAACTGCCGTCGTTGAAACATGTTGCCTGA

Protein sequence :
MSMSQTQQSHNAAASAVEIDDFNALLAREFKPRSDQTRSAVEGAVKTLAEQALVNAVTLSDDAYKCIASIIAEIDRKLSE
QINLILHHDEFQTLESAWRGLHYLVTHTETDEKLKLRFLDISKTDLRRTMKRYKGVAWDQSPLFKKVYEEEYGQLGGEPY
GCLVADYYFDHSAPDVDLLASLAKVAASAHVPFITGASPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRLAEDSRY
IGLAMPRFLARLPYGIRTNPVDEFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHT
FPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDADATANANLSARLPYMFACSR
FAHYLKCIVRDKIGTFKERDDMQRWLNDWIMNYVDADPTNSSLETKSRRPLAAAEVIVEDVEGNPGYYQAKFFLRPHFQL
EGLTVSLRMVAKLPSLKHVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 8e-78 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 6e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CTU_12160 YP_003209579.1 hypothetical protein VFG2070 Protein 2e-175 71
CTU_12160 YP_003209579.1 hypothetical protein VFG2475 Protein 5e-87 46
CTU_12160 YP_003209579.1 hypothetical protein VFG2093 Protein 3e-84 44