Gene Information

Name : ccmF (CTU_29700)
Accession : YP_003211333.1
Strain : Cronobacter turicensis z3032
Genome accession: NC_013282
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 3105272 - 3107221 bp
Length : 1950 bp
Strand : -
Note : -

DNA sequence :
ATGATGCCGGAAATCGGTAACTTCTTGCTGTGCCTCGCCGCCGGGCTGGCGCTGCTGCTCACGCTCTGGCCGCAGTGGGG
CGCGATGCGTCAGGCGCCGCGCCTGATGGCGCTGGCGCGCCCGCTCGCCTGTGCGCTCTTTGCCTGCTTGCTGGGCGCGT
TCTTGATCCTCGTGCACGCCTTTGTGGTGAATGATTTCACGGTGCTCTATGTGGCGAGCAATTCCAACACCGAGTTGCCG
GTCTGGTATCGCGTGGCGGCGACCTGGGGCGCGCATGAAGGATCGCTGCTGCTGTGGGTGCTGTTGATGGGCGCGTGGAC
GTTTGCAGTGGCTATCTTCAGCCGCGGGATGCCGCAGGAGGCGATCGCCCGCGTGCTGTCAGTGATGGGCGGGATTAATT
TCTGCTTCCTGCTCTTTATTCTGCTGACCTCAAACCCCTTCACCCGCACGCTGCCGGAATTTCCGATTGAAGGGCGCGAT
CTCAACCCGCTGCTTCAGGATATCGGGCTGATTTTTCATCCGCCGCTGCTGTATATGGGCTATGTCGGGTTTTCGGTCGC
GTTCGCCTTTGCCGTGGCGTCGCTCTTAACGGGGCGGCTCGACACCGCCTGGGCGCGCTGGTCGCGCCCGTGGACGCAGG
CGGCATGGGTGTTTCTGACCATCGGCATCGTGCTCGGCTCCGCCTGGGCCTATTACGAACTGGGCTGGGGCGGCTGGTGG
TTCTGGGACCCGGTCGAAAACGCGTCGCTGATGCCGTGGCTGGCGGGCACGGCGCTGATGCACTCGCTGGCGGTCACCGA
AAAACGCGGCAGCTTCCGCGCCTGGACGGTGCTGCTCGCCATCACCGCCTTTTCGCTCTGCCTGCTCGGCACATTCCTGG
TGCGCTCCGGCGTGCTGGTGTCCGTGCACGCGTTCGCCTCCGATCCGGCGCGCGGCATGTTTATTCTGGCGCTGCTGGTG
ATTGTCATCGGCGGCTCGCTGCTGCTGTATGCCGTAAAAGGCGGCAGCGTCAGGGCGCGGGTGGGCAATGCGCTCTGGTC
GCGTGAGAGCTTTCTGCTCGGCAACAATATTCTGCTGATCACCGCCATGCTGGTGGTGCTGCTCGGCACGCTGCTGCCGC
TGGTGCATAAGGCGCTGGGGCTGGGGTCGATTTCCGTCGGCGCGCCGTTTTTTAATGTGCTGTTTTGCGCGCTGATGGCG
CCGTTCGCGCTGCTGCTCGGCGTCGGGCCGCTGGTGCGCTGGCGGCGTGATGAGCCGCAGAAGCTGCGCCGTCGTCTGCT
GACGGCGTTGGTGGTCACGCTCGCGGCCTCGCTGATCCTGCCCTGGCTTTTGCAGGACAGCGTCAAAGCGATGACGGTCG
CCGGGCTGATGATGGCGGTCTGGGTGCTGGTGTTAACGCTGATGGAGCTGATTGATCGCGCCACGCACCGCTATAGTCTG
TGGCGCGGGCTGTGGAAATTAAGTCGCAGCCAGTGGGGCATGACGCTCGGGCACGTGGGGCTTGCCGTGACGGTCACTGG
CATCGCTTTCAGCCAGAACTACAGCGTGGAGCGCGACGTGCGCATGACGGCGGGCGACAGCGTCGATATTCACCATTACC
GCTTTGTGTTCCGCGAGGTGCGCGACGCGCAGGGACCGAACTGGCGCGGCGCGGTGGGCATTATCGATGTGCTGCGCGAC
GGTAAACCCGAGGCGACGCTGCGCGCCGAAAAGCGCGCCTATAACAGCAACCGTGTGGTGATGACCGAAGCCGCCATCGA
CGGCGGGCTGACGCGCGATCTCTACGCGGCGCTCGGCGAAGCACTCGACGACGGCAGCTGGGCGGTGCGGCTCTATTACA
AACCGTTTGTTCGCTGGATCTGGTATGGCGGGCTGCTGATGGCGCTCGGCGGGCTGCTTTGTATGCTTGACCCGCGTTAC
CGGCTGAAAAAAGCGCAGGAGGCTGCATGA

Protein sequence :
MMPEIGNFLLCLAAGLALLLTLWPQWGAMRQAPRLMALARPLACALFACLLGAFLILVHAFVVNDFTVLYVASNSNTELP
VWYRVAATWGAHEGSLLLWVLLMGAWTFAVAIFSRGMPQEAIARVLSVMGGINFCFLLFILLTSNPFTRTLPEFPIEGRD
LNPLLQDIGLIFHPPLLYMGYVGFSVAFAFAVASLLTGRLDTAWARWSRPWTQAAWVFLTIGIVLGSAWAYYELGWGGWW
FWDPVENASLMPWLAGTALMHSLAVTEKRGSFRAWTVLLAITAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILALLV
IVIGGSLLLYAVKGGSVRARVGNALWSRESFLLGNNILLITAMLVVLLGTLLPLVHKALGLGSISVGAPFFNVLFCALMA
PFALLLGVGPLVRWRRDEPQKLRRRLLTALVVTLAASLILPWLLQDSVKAMTVAGLMMAVWVLVLTLMELIDRATHRYSL
WRGLWKLSRSQWGMTLGHVGLAVTVTGIAFSQNYSVERDVRMTAGDSVDIHHYRFVFREVRDAQGPNWRGAVGIIDVLRD
GKPEATLRAEKRAYNSNRVVMTEAAIDGGLTRDLYAALGEALDDGSWAVRLYYKPFVRWIWYGGLLMALGGLLCMLDPRY
RLKKAQEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 3e-175 75
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 3e-118 55