Gene Information

Name : CD196_1792 (CD196_1792)
Accession : YP_003214816.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Virulence
Product : ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2070821 - 2072290 bp
Length : 1470 bp
Strand : +
Note : -

DNA sequence :
ATGACACTTTTAGATAAAGATTTAGTATCTATACAAGAAGTCAGAACTCTTGTAAGAAGATCTAAAGTGGCTCAAGAGAA
ACTTTCTAAAATGAGTCAAGAGCAAATAGATAAAATAGTAAAAGCTGTTGTAGATGCAGCATTTAATAATGCTACTAAAT
TAGCTAAAATGGCAAATGAAGAAACTGGATTTGGAAAATGGGAAGATAAAGTAATTAAAAATACTTTTGCATCTATGGGA
GTTTATGAAACTTTAAAGAACACAAAAACTATTGGAATAATTGGTGAAGATAAAGAAGCCAATACGATAGATATAGCTAC
ACCAGTTGGAGTTGTGGCAGGTCTTATACCTTCAACAAACCCAACATCAACAGTAATATACAAAACTATAATATCTCTAA
AAGCAGGAAATACTATAGTTTTCTCTCCACATCCAAATGCAAAAAACTGCATACTTGAAACAGTTAATATAATAAGTGAG
GCTGCTATAAAGGCTGGAGCTCCAGAGGATTCAATATTATGTATAACTAATCCAAGTATAGTTGGAACCAATGAATTGAT
GAAACATAAAGATACAAACTTAATACTAGCAACTGGAGGAGAAGCAATGGTTAGAGCTGCTTACTCTTCAGGAACACCAG
CTATTGGAGTTGGACCAGGAAATGGACCAGCATTTATAGATAAATCAGCAAATGTTAAATTAGCAATCAAAAGAATAATA
GATTCTAAAACTTTTGATAATGGTGTTATATGTGCATCAGAGCAATCTATAGTAATAGAAAAATCTATGGAAGAAACTGT
TTTAAAAGAGCTTAAAAATCAAGGTGCATATGTTTTAAATGAAGAGGAAAGTGAAAGATTAGCAAAATTCATATTAAGAG
CTAATGGTACTATGAATCCACAAATAGTTGGTAAAAGTGTTGAGGTAATAGCAAATTTAGCAGACTTAACAAATATACCT
AAAAATACAAAAGTTCTAGTTGCAAGAGAAAATAAAGTTGGTCACAATGTAGCCTATTCAAGAGAAAAACTTACACCAAT
ACTAGCGTTTTATGTTGAAGAAAATGTAGAAGCTATTATGAACAGATGTAGAGAAATATTGTTAAATGAAGGTGCAGGTC
ATACATTCTCAATGCATGTAAATGATGAAGAATTGGTAAAAAGATTTGCCCTTAATATGCCAGTATCAAGAATACTTGTG
AATACTCCTTCAGCACTTGGAGGAATAGGTGCATCAACAAACCTTGTACCAGCACTAACACTTGGTTGTGGTGCAATAGG
TGGAAGTTCAACTTCAAACAATATAGGACCACTTGATTTAATAAATGTTAAAAGAGTAGCTTATGGAATCAAAGAAATAG
AAGAACTTGGAAGAGATAAATCTCAAGTTGAAAAATCAATGTTTGACTCAATGGATAAAGAAGAATTAATAAATCTTCTT
GTTCAAAAACTAGTCAAAGAACTAGCATAA

Protein sequence :
MTLLDKDLVSIQEVRTLVRRSKVAQEKLSKMSQEQIDKIVKAVVDAAFNNATKLAKMANEETGFGKWEDKVIKNTFASMG
VYETLKNTKTIGIIGEDKEANTIDIATPVGVVAGLIPSTNPTSTVIYKTIISLKAGNTIVFSPHPNAKNCILETVNIISE
AAIKAGAPEDSILCITNPSIVGTNELMKHKDTNLILATGGEAMVRAAYSSGTPAIGVGPGNGPAFIDKSANVKLAIKRII
DSKTFDNGVICASEQSIVIEKSMEETVLKELKNQGAYVLNEEESERLAKFILRANGTMNPQIVGKSVEVIANLADLTNIP
KNTKVLVARENKVGHNVAYSREKLTPILAFYVEENVEAIMNRCREILLNEGAGHTFSMHVNDEELVKRFALNMPVSRILV
NTPSALGGIGASTNLVPALTLGCGAIGGSSTSNNIGPLDLINVKRVAYGIKEIEELGRDKSQVEKSMFDSMDKEELINLL
VQKLVKELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 4e-122 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CD196_1792 YP_003214816.1 ethanolamine/propanediol utilisation aldehyde-alcohol dehydrogenase VFG1595 Protein 2e-122 54