Gene Information

Name : tkt' (CD196_2164)
Accession : YP_003215185.1
Strain : Clostridium difficile CD196
Genome accession: NC_013315
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 2513705 - 2514625 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAATAGCAACTAGAGAAGCTTACGGACAAGTGTTAAAAGAACTTGCAGAAAATAAAGATATAGTAGTATTAGATGC
AGATTTAGGAAAAGCTACAAAAAGTATATCATTTAAAGAAGTTGCCCCAGATAGATTTTTTGACATGGGGATAGCAGAAG
GTGACATGATTGGTACAGCAGCAGGTCTTGCTACTTGTGGAAAAATACCTTTTGCGAGTACTTTTGCAATATTTGCAGCA
GGAAGAGGCTATGAGCAAATAAGAAACTCTGTAGCATATCCAAATTTAAATGTAAAAATAGCAGCTACTCATGCAGGTGT
AACAGTAGGTGAAGATGGTGGTAGCCATCAAGCTATAGAGGATATATCTCTAATGAGAGGTATACCAAATATGGTTGTAT
TAAATCCAGCAGATGCTTTAGAAGCAAGACAAGCTATTCTTGCATCTATTGATTATAATGGACCTGTTTATATAAGATTA
GGTAGAGCTGCAACTCCTGATGTAAACAGTGAAAATTATAAATTTGAAATAGGAAAAGGAACTGTTTTAAGAGAAGGTTC
TGACATAACAGTAATAGCTACAGGAATAATGGTAGCAAAAGCCTTAGAAGCAGCAGAAGAACTTGCTAAAGAAGGTATAA
ATGTAGAAGTTGTTAATATATCTACAATAAAACCATTAGATGAAGCATTAATAAAAGAAACTGCTAAGAAAACTGGAAAA
GTAGTTACAGCAGAGGAGCACAGTATAATAGGTGGTTTAGGTTCAGCTGTATGTGAAGCTTTAGCAGAAACTAAAGATGT
AGTAGTTAGAAGAATTGGTGTTAAAGATGTATTTGGTCAATCAGGTACACCAGCTGATTTATTAAAACACTATGGTTTAA
CTACAGAAGATATAGTAAAAAATATAAAAGAGTTGTTATAG

Protein sequence : 
MGIATREAYGQVLKELAENKDIVVLDADLGKATKSISFKEVAPDRFFDMGIAEGDMIGTAAGLATCGKIPFASTFAIFAA
GRGYEQIRNSVAYPNLNVKIAATHAGVTVGEDGGSHQAIEDISLMRGIPNMVVLNPADALEARQAILASIDYNGPVYIRL
GRAATPDVNSENYKFEIGKGTVLREGSDITVIATGIMVAKALEAAEELAKEGINVEVVNISTIKPLDEALIKETAKKTGK
VVTAEEHSIIGGLGSAVCEALAETKDVVVRRIGVKDVFGQSGTPADLLKHYGLTTEDIVKNIKELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 6e-47 49
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 1e-38 47
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 8e-52 46
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 9e-52 46