Gene Information

Name : CDR20291_1841 (CDR20291_1841)
Accession : YP_003218328.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : propanediol/ethanolamine utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 2154126 - 2154755 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence :

ATGGAGAATCTATTAAATGAAATAGTGGAAGAAGTAATAACTAGAGTTAAAAAAGAAGCATTTATAGAAGTTGAAGCATC
AGGAAGACACGTTCACTTAAGTAGAGAAGATGTCGATAAATTATTTGGAGAAGGATATACTCTTACAAAACTAAAAGACC
TATCTCAACCAGGTCAATATGCATGTAAGGAAAGAGTTACAATAACTGGTCCTAAAGGAAGTATAAAAAATGTAGTTGTA
CTTGGACCATGTAGAAATGAAACTCAGGTAGAAATATCTTTAACAGATGGTTCAACTCTTGGACTAAAAGCTCCTATAAA
ACAAAGTGGAGACTTAGAAGGTACTTTAAGTATTAAAATATCAACACAATATGGTGAAGTTGAACTTGATAAGGGGTTAA
TGGTTGCTAAAAGACATATACACATGACTCCTAAAGATGCTGAAAAATTCAATGTATGTGATAAAGAGATAGTTGAAGCC
AAGGTGATGGGTCAAAGACCTTTAACATTTGATGATGTAGTAATAAGAGTGAGTGACAGTTTTAAAACTTATATGCATAT
AGACTATGATGAAGCCAATGCATGTGGTTATTCAAAAGGAACTGTTGCTAAAATAATAAAGAAAGCATAA

Protein sequence :

MENLLNEIVEEVITRVKKEAFIEVEASGRHVHLSREDVDKLFGEGYTLTKLKDLSQPGQYACKERVTITGPKGSIKNVVV
LGPCRNETQVEISLTDGSTLGLKAPIKQSGDLEGTLSIKISTQYGEVELDKGLMVAKRHIHMTPKDAEKFNVCDKEIVEA
KVMGQRPLTFDDVVIRVSDSFKTYMHIDYDEANACGYSKGTVAKIIKKA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	1e-38	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CDR20291_1841	YP_003218328.1	propanediol/ethanolamine utilization protein	VFG1589	Protein	7e-39	47