Gene Information

Name : CDR20291_2571 (CDR20291_2571)
Accession : YP_003219050.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 3016720 - 3017289 bp
Length : 570 bp
Strand : -
Note : -

DNA sequence :

ATGAAATTACCAATAGCATTATCTAATAAACATGTTCATTTGAGTCAAGCTGATATAGACGTATTATTTGGGGCGGGTCA
TGAGTTAACTAAATTTAAACCATTATCTCAACCAGGGCAATATGCCTGTGAAGAAAAAGTGGATTTAGTAGGACCAAAAG
GAACTTTAAAGGGAGTTAGAGTACTAGGACCAGCTAGAGCTCATACTCAAGTTGAAATATCTTTAGCAGATGGTTTCCCA
TTAGGAGTAAAAGCACCAATAAAAGAATCTGGTGATATAGCTGGAACTCCAGGTGTTAAATTAGTAGGACCTGCTGGAGA
AGTTGAAATGAAAGAAGGAGTTATAGTTGCTTCTAGACATATACATATGAGCAATGAAGATGCTGCTAAATTTGGTGTAA
CTGATAAGCAAATAGTAAAAGTTAAAACATCTGGACCAAGAGCATTAGTATTTGAAAATGTATTAGTAAGAGCTAGTGAT
AGCTTTAATCTAGAAATGCATGTTGATATGGAAGAGGGAAATGCAGCAGGCGTTAAAAATGGAGATTTAGTAGAATTAAT
AGTTGATTAA

Protein sequence :

MKLPIALSNKHVHLSQADIDVLFGAGHELTKFKPLSQPGQYACEEKVDLVGPKGTLKGVRVLGPARAHTQVEISLADGFP
LGVKAPIKESGDIAGTPGVKLVGPAGEVEMKEGVIVASRHIHMSNEDAAKFGVTDKQIVKVKTSGPRALVFENVLVRASD
SFNLEMHVDMEEGNAAGVKNGDLVELIVD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42070.1	hypothetical protein	Not tested	PAI II 536	Protein	2e-48	55

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CDR20291_2571	YP_003219050.1	propanediol utilization protein	VFG1589	Protein	7e-49	55