|
Name : cobT (CDR20291_3261) Accession : YP_003219736.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG2038 EC number : - Position : 3895035 - 3896081 bp Length : 1047 bp Strand : - Note : - DNA sequence : ATGAGTTTATTAGAAAGTATATCAAAAAACATATATTCCCTAGATAACTCTTCTATTGAAAAAACAAAGCAGAGATTGGA TAGGCTTATACATCCAACTGGAAGCTTAGGAAAGATAGAAGATATTTGCATGCAATTGGCAGGAATATTTGGCAATGAAA ATTTTGACACAAGTAAAAAGGTTATAATTGCTTTTGCGGGAGACCATGGTGTATATGAAGAAGGCGTAGCACCTGACCCT CAAAATATAACAAAATTACAGTTTCCAAATTTTTCGAAAGGTCTATGTGGAGTTGGAGTAATAAGTAAATTTGTAGGGGC AGATGTTGTAGCTGTAGATGTAGGAATAAACTGTGATGAAAAACTGGATGGGGTATTAGACTACAAGATAAGAAAAGGGA CATCAAATATGGCAAAAGGTCCAGCTATGAGTAAACAAGAAGCCATTAGATGTTTAGAGATAGGTATTGAAATAGCAGAG CAGTGTATAGAAAAAGATTATAAGGTTATTGGTATTGGGGAGATGGGTATAGCAAATACTACTCCAAGTACAGCAATAAT ATCTGTAATTTCAGGGTGTGACCCGTTAGAAGTTACTGGTATAGGTGCAGGTCTTAAGAAAGAAAGACTAAAGCATAAGG CTGAAGTAATTAGAAAGGCTATTGAAATTAATAATCCAAATCCAACTGATGGAGTAGATATTTTATCTAAAGTAGGAGGA TTTGAAATAGGCTCAATGGCAGGTGTTATATTAGGTTGTAGTGCTAATAGGATTCCAGTAGTAATTGATGGGTTTATTTC TTATGCAGCAGCATTAATTGCATATAAGATAAATCCAAAAACTAGAGAATATATGATAGCATCTCATTTATCAGCAGAAT CAGGAACTAAAAGAGCATTAGACATATTAAAATTAGACCCTCTATTAAATATGGATATGAGATTAGGTGAGGGAAGTGGA GCTGCTTTAGCATTTGATATAATAGAAGCTTCAAACTATACTTACAAAAATATGGCAACTTTTGATGAAATTGACATGGG AAGATAA Protein sequence : MSLLESISKNIYSLDNSSIEKTKQRLDRLIHPTGSLGKIEDICMQLAGIFGNENFDTSKKVIIAFAGDHGVYEEGVAPDP QNITKLQFPNFSKGLCGVGVISKFVGADVVAVDVGINCDEKLDGVLDYKIRKGTSNMAKGPAMSKQEAIRCLEIGIEIAE QCIEKDYKVIGIGEMGIANTTPSTAIISVISGCDPLEVTGIGAGLKKERLKHKAEVIRKAIEINNPNPTDGVDILSKVGG FEIGSMAGVILGCSANRIPVVIDGFISYAAALIAYKINPKTREYMIASHLSAESGTKRALDILKLDPLLNMDMRLGEGSG AALAFDIIEASNYTYKNMATFDEIDMGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 3e-63 | 44 |
