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Name : tkt' (CDR20291_3295) Accession : YP_003219770.1 Strain : Clostridium difficile R20291 Genome accession: NC_013316 Putative virulence/resistance : Unknown Product : transketolase, pyridine binding subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : - Position : 3933709 - 3934641 bp Length : 933 bp Strand : - Note : - DNA sequence : ATGGCGACGAGAGAAGCATATGGTAAAGCATTAGTAAAATTAGGTCAAATAAATGACAATGTTGTAGTATTAGATGCAGA TTTATCAAAGTCTACAAAAACACATGATTTTTACAAGTCATTTCCAGATAGATTTTTTAATATGGGTATAGCTGAACAAA ATTTAATAGGCGCTGCTTGTGGATTATCAACTGCTGGTAAAATACCTTTTGCAAGTACTTTTGCTATGTTTGCTACGGGA AGGGCTTTTGAGATTATAAGAAATTCAGTTTGTTATCCAAAGCTAAATGTAAAAATATGTGCTACTCATGCAGGTCTTAC TGTTGGAGAGGATGGAGCATCTCATGAAAGTGTGGAAGATATTGCTATAATGAGAGCTATACCAAATATGACAGTTCTTG TTCCAGCTGATGGAGTTGAAACAGAAAAAATTATTTTTGAAATAGCTAAGTATAATGGACCTGTTTATGTTAGATTAGGG AGAAGTTCAGTACCAGTTTTATTTGATGAAGATTATAAATTTGAAATAGGAAAAGGTACAGTCTTAAGAGAAGGAAAGGA TGTATCAATTATAGCTTGTGGAATTATGGTAAATGAAGCTCTATTAGCACAAGAAAAGTTGCAAGAAGAAGGTATAAATG CTAGAGTTATAAACATGTCCTCGATAAAACCTATAGACAAAGATTTAATATTAGAATCAGCAAAAGAAACGAATGCTATT GTAACTGTAGAAGAACATAGCATAATTGGGGGATTAGGTTCTGCTGTAAGTGAGGTAGTAGGAGAGTCTTGTCCAACCAT TGTAAAGAAAGTTGGAATTAAAGATACATTTGGAGAATCTGGTACTCCAAATGAATTGTTAAAAAAATATGAATTAACTT GTGATGACATAATAAAGACTGTTAAAGAAGCTATTATTGCAAAAAGAATGTAA Protein sequence : MATREAYGKALVKLGQINDNVVVLDADLSKSTKTHDFYKSFPDRFFNMGIAEQNLIGAACGLSTAGKIPFASTFAMFATG RAFEIIRNSVCYPKLNVKICATHAGLTVGEDGASHESVEDIAIMRAIPNMTVLVPADGVETEKIIFEIAKYNGPVYVRLG RSSVPVLFDEDYKFEIGKGTVLREGKDVSIIACGIMVNEALLAQEKLQEEGINARVINMSSIKPIDKDLILESAKETNAI VTVEEHSIIGGLGSAVSEVVGESCPTIVKKVGIKDTFGESGTPNELLKKYELTCDDIIKTVKEAIIAKRM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 3e-46 | 47 |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 1e-38 | 45 |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 4e-49 | 42 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 3e-49 | 42 |
