Gene Information

Name : tkt (CDR20291_3296)
Accession : YP_003219771.1
Strain : Clostridium difficile R20291
Genome accession: NC_013316
Putative virulence/resistance : Unknown
Product : transketolase, thiamine disphosphate-binding subunit
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : -
Position : 3934643 - 3935470 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence : 
ATGAGAGACCATAAAGGATTAAATGAGATTGCGCGTATCATAAGAAGAGATATAGTTTCAATGATACATAGAGCCAAATC
TGGACATCCAGGAGGGTCATTATCAGTAGTTGAAATACTTACTGCGTTATACTTTGATGAAATGAATGTGGATTCTTCAA
ATCCTAAAATGGAGGATAGAGATAGATTTGTATTATCAAAAGGACATGCTGCACCAGCATTATATGCTACATTGGCTGAA
AAAGGCTATTTTGATAAGGAAGAACTGAATGGATTAAGGAAGATAGGAAGGATGTTACAAGGTCATCCAGACATGAAAGG
CACGCCAGGTGTGGAAATATCTACTGGTTCTTTAGGTCAAGGTTTTTCAGTAGCATGTGGTATGGCTATGGCATCAAAGT
TGGATAATGCTCCGTGGAATGTGTATACTTTGCTTGGTGATGGTGAGGTTCAAGAAGGAATTGTTTGGGAAGCTGCTATG
AGTGCTGCACATTATAAACTTGATAATTTAATTGCTTTTTTAGATAATAATGGACTTCAAATAGATGGAGATATAGAAAG
CGTAATGAGTTTAGGTTCAATAGTTGATAAATTTAAAGCTTTTGGTTGGAATGTAATTGAGATAGATGGACATGATTTTG
ACCAAATATTTGCGGCTCTTGATATAGCTAAATCAACAGTTAAAAAACCTACAATGATAGTTGCAAAAACTATAAAAGGC
AAAGGAATATCTTTTATGGAAAATCAAGCAGGATGGCATGGGACAGCTCCAAGTGATGAGGAGCTAGAAAAAGCCTTGCT
TGAATTAGGAGGTGCTGACAATGAGTAA

Protein sequence : 
MRDHKGLNEIARIIRRDIVSMIHRAKSGHPGGSLSVVEILTALYFDEMNVDSSNPKMEDRDRFVLSKGHAAPALYATLAE
KGYFDKEELNGLRKIGRMLQGHPDMKGTPGVEISTGSLGQGFSVACGMAMASKLDNAPWNVYTLLGDGEVQEGIVWEAAM
SAAHYKLDNLIAFLDNNGLQIDGDIESVMSLGSIVDKFKAFGWNVIEIDGHDFDQIFAALDIAKSTVKKPTMIVAKTIKG
KGISFMENQAGWHGTAPSDEELEKALLELGGADNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 1e-36 41
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 1e-36 41
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 9e-37 41
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 7e-37 41
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 5e-37 41