Gene Information

Name : hlyB (ECO111_p3-03)
Accession : YP_003237752.1
Strain :
Genome accession: NC_013366
Putative virulence/resistance : Virulence
Product : hemolysin B
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 3564 - 5684 bp
Length : 2121 bp
Strand : +
Note : -

DNA sequence :
ATGATGAGTAAATGTAGTTCTCATAATAGTCTGTATGCACTGATATTGCTTGCACAATATCATAATATAACTGTCAATGC
TGAAACTATAAGGCATCAGTATAATACCCACACACAAGATTTTGGGGTGACTGAATGGTTACTGGCAGCGAAATCCATTG
GCTTAAAAGCAAAATATGTAGAAAAACATTTTTCCAGATTGTCAATAATTTCTTTACCTGCGTTGATATGGCGGGATGAC
GGTAAGCATTATATATTGTCTCGTGTTACTAAAGATTCATCACGCTATCTTGTTTATGATCCAGAACAACATCAGTCACT
AACTTTTAGTCGGGATGAGTTTGAAAAACTGTATCAGGGAAAAGTCATTCTGGTTACGTCAAGAGCAACAGTAGTCGGAG
AGTTAGCTAAATTTGATTTTTCTTGGTTTATCCCCTCTGTTGTGAAATACAGGAGGATTTTACTTGAGGTGTTAACTGTT
TCTGCTTTTATTCAGTTTCTTGCGTTAATAACACCTCTTTTTTTTCAGGTTGTAATGGATAAGGTTTTAGTTCACCGGGG
GTTTTCAACGTTAAATATTATCACAATAGCATTTATTATAGTGATACTTTTTGAAGTGATATTAACCGGAGCCAGAACTT
ATATTTTCTCTCATACTACAAGTCGTATTGACGTCGAACTGAGCGCTAAGTTATTCAGACATTTGCTTGCATTGCCTGTT
TCATATTTTGAAAATCGCAGGGTCGGAGAGACCGTTGCCAGAGTAAGGGAACTGGAGCAAATTCGTAATTTTTTAACCGG
ACAAGCGTTGACATCAGTTCTTGATCTATTTTTTTCTGTAATATTTTTTTGTGTCATGTGGTATTACAGCCCTCAATTAA
CACTGGTTATATTATTGTCACTACCTTGTTATGTTATATGGTCATTGTTTATATCACCCTTATTACGTCGACGTCTTGAT
GATAAGTTTCTCAGGAATGCAGAAAATCAAGCTTTTCTTGTCGAAACGGTAACAGCAATAAATACAATTAAATCCATGGC
AGTATCACCACAGATGATTGCTACATGGGATAAACAACTGGCCGGGTATGTTGCTTCCAGTTTCAGGGTAAATCTGGTTG
CAATGACAGGGCAGCAGGGGATACAGCTGATACAGAAAAGTGTAATGGTAATTAGTCTATGGATGGGAGCACATCTTGTC
ATATCGGGAGAGATAAGCATCGGGCAGTTAATCGCGTTTAATATGCTTGCAGGTCAGGTCATTGCTCCTGTTATCAGACT
GGCTCATCTTTGGCAGGATTTTCAGCAGGTTGGTATTTCTGTTGAGCGCCTTGGTGATGTATTAAATACACCGGTAGAGA
AAAAGTCAGGCAGAAATATACTGCCGGAAATTCAGGGGGATATCGAATTTAAAAATGTCAGATTTCGGTATTCTTCTGAC
GGTAATGTTATTTTGAATAATATTAATTTATACATATCAAAGGGGGATGTTATCGGTATAGTTGGCCGTTCTGGTTCAGG
AAAAAGTACATTAACAAAACTGCTTCAGCGCTTTTATATACCAGAGACCGGACAGATTTTAATTGATGGGCATGATTTAT
CACTTGCAGATCCAGAATGGTTACGACGCCAGATTGGTGTTGTATTGCAGGAAAATATACTATTAAATCGTAGTATTATC
GATAATATTACATTAGCTTCTCCGGCTGTATCTATGGAACAGGCTATTGAGGCAGCCAGACTTGCAGGTGCCCATGATTT
TATTACAGAACTAAAAGAAGGGTACAATACTATTGTTGGAGAACAGGGCGTTGGTCTTTCAGGAGGGCAGCGCCAACGGA
TCGCAATAGCCCGGGCTCTTGTTACAAATCCTCGAATTCTTATTTTTGATGAAGCAACCAGTGCTCTTGATTATGAGTCG
GAAAATATAATAATGAAAAATATGTCAAGAATATGTAAGAACAGAACCGTAATTATTATTGCACACAGGTTGTCAACTGT
AAAAAATGCAAACAGAATAATTGTTATGGATAATGGCTTTATTTCTGAAGATGGCACACATAAAGAGCTTATCTCCAAAA
AAGACAGTTTATATGCATATTTATATCAGTTGCAGGCATAA

Protein sequence :
MMSKCSSHNSLYALILLAQYHNITVNAETIRHQYNTHTQDFGVTEWLLAAKSIGLKAKYVEKHFSRLSIISLPALIWRDD
GKHYILSRVTKDSSRYLVYDPEQHQSLTFSRDEFEKLYQGKVILVTSRATVVGELAKFDFSWFIPSVVKYRRILLEVLTV
SAFIQFLALITPLFFQVVMDKVLVHRGFSTLNIITIAFIIVILFEVILTGARTYIFSHTTSRIDVELSAKLFRHLLALPV
SYFENRRVGETVARVRELEQIRNFLTGQALTSVLDLFFSVIFFCVMWYYSPQLTLVILLSLPCYVIWSLFISPLLRRRLD
DKFLRNAENQAFLVETVTAINTIKSMAVSPQMIATWDKQLAGYVASSFRVNLVAMTGQQGIQLIQKSVMVISLWMGAHLV
ISGEISIGQLIAFNMLAGQVIAPVIRLAHLWQDFQQVGISVERLGDVLNTPVEKKSGRNILPEIQGDIEFKNVRFRYSSD
GNVILNNINLYISKGDVIGIVGRSGSGKSTLTKLLQRFYIPETGQILIDGHDLSLADPEWLRRQIGVVLQENILLNRSII
DNITLASPAVSMEQAIEAARLAGAHDFITELKEGYNTIVGEQGVGLSGGQRQRIAIARALVTNPRILIFDEATSALDYES
ENIIMKNMSRICKNRTVIIIAHRLSTVKNANRIIVMDNGFISEDGTHKELISKKDSLYAYLYQLQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 73
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 73
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyB YP_003237752.1 hemolysin B VFG0841 Protein 0.0 99
hlyB YP_003237752.1 hemolysin B VFG1501 Protein 0.0 73
hlyB YP_003237752.1 hemolysin B VFG0907 Protein 0.0 73
hlyB YP_003237752.1 hemolysin B VFG1557 Protein 0.0 73
hlyB YP_003237752.1 hemolysin B VFG1269 Protein 0.0 53