Gene Information

Name : GYMC10_4102 (GYMC10_4102)
Accession : YP_003244137.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 4678737 - 4679309 bp
Length : 573 bp
Strand : -
Note : PFAM: Propanediol utilization protein; KEGG: pjd:Pjdr2_3371 propanediol utilization protein

DNA sequence :
ATGAGTAAAACTGTACCTGTGGGTGTATCCGCCCGCCATATTCATTTAACCCAAGAGCATATTGAGGCATTGTTCGGCCC
TGGATATCAACTTACAGAGTTCAAACCTTTGTCCCAGCCAGGACAATTCGCGGCCAACGAAACGGTAGCGGTCATTGGAA
CGAAGGGACAATTCGATAAAGTAAGAATTTTGGGACCTGCGCGTCCTGCAACCCAACTGGAAATTTCCCGTACGGATTCC
TTTGCCATCGGCGTGAAAGCACCCGTGCGCGAATCCGGTAACATTGCCGGAACCCCGGGAATCACGATTAAAGGCCCGGC
AGGTGAAGTAACGGTAAACGAAGGCGTCATCGTGGCCGCTCGTCATATTCACTTCCATACATCCGATGCGGAGCAGTGGG
GCATCAAGGACAAGGACCTGCTCAAAGTGCGCCTAGGCGGCGAACGCGGCCTCGTGCTGGAGAACGTCATTGCCCGCGTA
TCCGACAATTTTGCGCTCGACATGCACATCGACACCGATGAGGCCAACGCGGCCGGCGCCAAAAACGGAGACACTGCTGA
AATTATTGATTAA

Protein sequence :
MSKTVPVGVSARHIHLTQEHIEALFGPGYQLTEFKPLSQPGQFAANETVAVIGTKGQFDKVRILGPARPATQLEISRTDS
FAIGVKAPVRESGNIAGTPGITIKGPAGEVTVNEGVIVAARHIHFHTSDAEQWGIKDKDLLKVRLGGERGLVLENVIARV
SDNFALDMHIDTDEANAAGAKNGDTAEIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 8e-49 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_4102 YP_003244137.1 propanediol utilization protein VFG1589 Protein 3e-49 55