Gene Information

Name : GYMC10_5016 (GYMC10_5016)
Accession : YP_003245036.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5675976 - 5676734 bp
Length : 759 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK3052 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAATCAGAAGAGTTTGTTATCGGTTCGCAATATCCACAAGACCTATGATGGAGACGGATTTAAAGTTCAAGCGCTAAA
GAATGTTTCGTTTGGGCTGGCGGAGGGCGAATTGGTGGCGATTATGGGAACCAGCGGCTCCGGAAAAAGCACCCTGCTTA
ACATTATCAGCTCCTTGGACACCCCGAGCTCAGGCAGCATCGAGTTAAAGGGAGAGGTCATGGACCATATCTTCGCGGAA
CCTCATGCAACCCGCTACCGACGAGAAAATATCGGTTTTGTATTTCAATCTTTTCATTTATTGAATGATTTAAGCGTAGA
AGAGAACATGGCGATTCCCTTGATCTTGCAAGGGGCATCGGAGGCGGAGATTCAGCACAAAGTCCAGGACATGCTCACTC
TGCTTGGACTTGCGAGCTGGAGGAAGAAGCGGCCAGTTCAGCTGTCCGGGGGACAGCAGCAGCGGGTAGCCATCGGCCGG
GCGCTGATTACGAATCCGCCGCTGCTGCTGGCAGACGAGCCTACCGGCAATCTGGATTACAATACCTCAAAGGAAATTCT
TGAAGCTTTGGTGGAGATGAGAAGCGCCTTCAATCAAAGCATGATTATAGTAACGCATGATCCGAATGTAGCGGTTTATG
CCGATCGGGTGTTATTTTTCCATGACGGTCAAATCGTGGATCAGTATGAGAGCAGCGGAGAGCGAAAGATGGATCCGATA
TTGAACATATTCAAGAAGATGATGGAGTTATCCGCATGA

Protein sequence : 
MNQKSLLSVRNIHKTYDGDGFKVQALKNVSFGLAEGELVAIMGTSGSGKSTLLNIISSLDTPSSGSIELKGEVMDHIFAE
PHATRYRRENIGFVFQSFHLLNDLSVEENMAIPLILQGASEAEIQHKVQDMLTLLGLASWRKKRPVQLSGGQQQRVAIGR
ALITNPPLLLADEPTGNLDYNTSKEILEALVEMRSAFNQSMIIVTHDPNVAVYADRVLFFHDGQIVDQYESSGERKMDPI
LNIFKKMMELSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GYMC10_5016 YP_003245036.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-43 48
GYMC10_5016 YP_003245036.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-36 47
GYMC10_5016 YP_003245036.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-41 44
GYMC10_5016 YP_003245036.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-36 42