Gene Information

Name : GYMC10_0535 (GYMC10_0535)
Accession : YP_003240645.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 649298 - 649498 bp
Length : 201 bp
Strand : +
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_0302 cold-shock DNA-binding domain protein

DNA sequence :
ATGCAAACAGGAACTGTTAAATGGTTTAATGCTGAAAAGGGCTTTGGTTTCATCGAAGTTGAAGGCGGTAACGATGTATT
CGTTCACTTCAGCGCGATCCAAGGCGACGGCTTCAAAACGCTTGACGAAGGCCAACGCGTTGAATTCAACATCGTTGAAG
GAAACCGTGGACCACAAGCTGAGAACGTTGTTAAATTGTAA

Protein sequence :
MQTGTVKWFNAEKGFGFIEVEGGNDVFVHFSAIQGDGFKTLDEGQRVEFNIVEGNRGPQAENVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-15 62
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 5e-04 42