Gene Information

Name : GYMC10_5860 (GYMC10_5860)
Accession : YP_003245872.1
Strain : Paenibacillus sp. Y412MC10
Genome accession: NC_013406
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 6575240 - 6575437 bp
Length : 198 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_5748 cold-shock DNA-binding domain protein

DNA sequence :
ATGCAAGGTAAAGTGAAATGGTTCAACGCAGAGAAAGGTTATGGCTTCATCGAGACTGAGGACGGCGGCGACGTATTCGT
ACATTTCTCCGCGATCCAATCCGAGGGCTTCAAGACTCTGGAAGAAGGACAATCCGTAGAATTCGAGATCGTTGAAGGCG
CTCGTGGCCCGCAAGCAGCTAACGTAATCAAATTATAA

Protein sequence :
MQGKVKWFNAEKGYGFIETEDGGDVFVHFSAIQSEGFKTLEEGQSVEFEIVEGARGPQAANVIKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-16 67
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 5e-04 43