Gene Information

Name : cysB (D11S_1245)
Accession : YP_003255846.1
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : transcriptional regulator CysB
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1170074 - 1171045 bp
Length : 972 bp
Strand : +
Note : LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes

DNA sequence : 
ATGAAATTTCAGCAACTTAGTTACGTGGTTGAGATTGTGAACCAAAATTATAATGTCACGGAAGCTGCACATGCGTTATA
CACCTCCCAACCGGGAATTAGTAAGCAGGTTCGTTTATTGGAAAATGAGCTTGGTTTGGAGATTTTTGATCGTCACGGTA
AACATATTAAAGGGCTTACGCCCGCCGGTAAAAAAATCGTGGGTATTTCCCGGGAATTAATGGTGAAAATGCAAGCGATT
CGTTCCGTGTCCGACGAATATACTAAACCGGATCACGGTGTGTTGCGCATTGCCACCACAAACACCCAGGCACGTTATAT
GTTGCCTCATGTGGTAGAACGTTTTGCCAAACGTTATCCTGATGTGAGTTTACACATTCATCAGGGTTCTCCAATGCAGA
TTTATGATGTGCTATTGTCCGGTGAAGTGGACTTGGCAATTACCACGGAAGCTCAATATTTATTTGATGGCGTGGTGTTG
CTGCCATGTTATATGTGGAATCGCTCGGTCATTGTGAAGTCAGATCATCCGTTAGCCAAATGTGAGCTACTGACTATCGA
AGAATTAGGCAAATATCCTTTAATTACTTATACTTTCGGCTTTACCGGCGTTTCCGATTTGGATTATGCCTTTAATGGTG
CCGGTATCCTGCCGAATATTGTATTTACCGCTACCGATGCGGATGTTATCAAAACCTATGTCCGTTTAGGCTTAGGTGTG
GGCATTATGGCGTCCATGGCGCATACGCCGGCGGATGTTGATTTGGTGGCACTTAAAGCGGATCATTTATTCCGCGCCAG
CATGACGCAAATCGCCTTTAAACACGGCGCTTTCCTGCGTAATTATATGTATGATTTTATCAACTATTTTTCACCGCACT
TAACCCGTGAAAACGTGGAACGGGCAGAGCGTATGCACGACAATAATGCGGTGAAAAGATTATTTGATGACGTCAGATTG
CAAACTTTGTAA

Protein sequence : 
MKFQQLSYVVEIVNQNYNVTEAAHALYTSQPGISKQVRLLENELGLEIFDRHGKHIKGLTPAGKKIVGISRELMVKMQAI
RSVSDEYTKPDHGVLRIATTNTQARYMLPHVVERFAKRYPDVSLHIHQGSPMQIYDVLLSGEVDLAITTEAQYLFDGVVL
LPCYMWNRSVIVKSDHPLAKCELLTIEELGKYPLITYTFGFTGVSDLDYAFNGAGILPNIVFTATDADVIKTYVRLGLGV
GIMASMAHTPADVDLVALKADHLFRASMTQIAFKHGAFLRNYMYDFINYFSPHLTRENVERAERMHDNNAVKRLFDDVRL
QTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 2e-56 41