Gene Information

Name : D11S_1454 (D11S_1454)
Accession : -
Strain : Aggregatibacter actinomycetemcomitans D11S-1
Genome accession: NC_013416
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1381388 - 1382872 bp
Length : 1485 bp
Strand : -
Note : identified by Exonerate; putative

DNA sequence :
ATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCTTAACACATGCAAGTCGGACGGTAGCAGGTAAGTA
CTTGTACTTATGCTGACGAGTGGCGGACGGGTGAGTAATGCTTGGGAATCTGTCTTATGGAGGGGGATAACGACGGGAAA
CTGTCGCTAATACCGCGTAGAATCGGGAGATGAAAGTGTGGGACCTTCGGGCCACATGCCATAGGATGAGCCCAAGTGTG
ATTAGGTAGTTGGTGGGGTAAAGGCCTACCAAGCCGACGATCGCTAGCTGGTCTGAGAGGATGGCCAGCCACACCGGGAC
TGAGACACGGCCCGGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGACGCAGCCATGCCG
CGTGAATGAAGAAGGCCTTCGGGTTGTAAAGTTCTTTCGGTGATGAGGAAGGTTGGTGTGTTAATAGCATGCCAAATTGA
CGTTAAATACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTAATCGGAATA
ACTGGGCGTAAAGGGCACGTAGGCGGACCTTTAAGTGAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTCATA
CTGGGGGTCTGGAGTACTTTAGGGAGGGGTAGAATTCCACGTGTAGCGGTGAAATGCGTAGAGATGTGGAGGAATACCGA
AGGCGAAGGCAGCCCCTTGGGGATGTACTGACGCTGATGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA
GTCCACGCTGTAAACGGTGTCGATTTGGGGATTGGGGTTTAGCCCTGGTGCCCGAAGCTAACGTGATAAATCGACCGCCT
GGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA
TGCAACGCGAAGAACCTTACCTACTCTTGACATCCGAAGAAGAACTCAGAGATGGGTTTGTGCCTTAGGGAGCTTTGAGA
CAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTG
TTGCCAGCGACTTGGTCGGGAACTCAAAGGAGACTGCCGGTGATAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCA
TGGCCCTTACGAGTAGGGCTACACACGTGCTACAATGGCGTATACAGAGGGTAACCAACCAGCGATGGGGAGTGAATCTC
AGAAAGTACGTCTAAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCGAATCAGAAT
GTTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGTACCAGAAGTAGATAGCT
TAACCGAGAGGGGGGCGTTTACCACGGTATGATTCATGACTGGGG

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-126 85.8