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Name : Pecwa_0212 (Pecwa_0212) Accession : YP_003257674.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : shikimate transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2223 EC number : - Position : 239529 - 240926 bp Length : 1398 bp Strand : + Note : TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eca:ECA0225 shikimate transporter DNA sequence : ATGGACACCTCAACTACGCCAACTCTCTCACAACCTGGCGGCTCTTTACCCCATCAGGATGACTCTCTTCCCTCTGATAA AACCCTACAAACACAGTTAGAAAGCCATTCTCAACATCGAGCGAAACGCGCAGCATGGGGCAGTTTTGTGGGTGCGGTTG TTGATTGGTACGATTTCTTGCTGTACGGAATTGTTGCCGCTCTGGTATTTAATACCGAATTTTTTCCGCAGGTCAGCCCG ACGATGGGGACGTTGGCGGCATTTGGTACGTTCGGTGTGGGTTTCCTGTTTCGCCCGTTAGGCGGTATGGTATTCGGTCA CTTTGGTGACAAGCTGGGCCGTAAACGGATGTTGATGATTACGGTCTGGATGATGGGTATTTCCACTGCATTGATTGGAC TGTTGCCGTCGTTTGATTCCATTGGTTGGTGGGCGCCGGTGCTGTTGGTTATGCTGAGAGCCATTCAGGGTTTTGCGGTC GGTGGCGAATGGGGCGGGGCGGCACTGTTGGCGGTAGAGAGCGCACCGAAGAAAAAGAAAGCTTTTTACAGCAGTGGCGT ACAGGTTGGTTTTGGTGTGGGCCTGTTACTGGCAACCGGTTCGGTCTCGGTGGTCAGCAATTTGACCACCAATGAAGAAT TTACCAACTGGGGTTGGCGTTTGCCGTTCTTATTCAGCCTGATTTTGGTTGCTATCGCCTGGTGGGTACGTAACGGGATG GATGAGTCTCAGGAATTTGAGGCGAATAAAACTCTGGGTGATAGAGCAAAAAAACTGCGTTCGTTCCCGATTATGGACGC ACTGCGCCAGCATCCTAAAGCCTTCCTACTGATTATTGCGTTACGGCTTGGTGAACTGTTGACGATGTATATCGTCACCG CATTTGCACTCAATTACTCCACCACCCACCTTGGCTTGTCGCGGGATATCTTTCTGAATATTGGACTGCTGGTGGGGGCG ATCAGTTGCGTGTCCATCCCTTTCTTTGCTTATCTGGCGGATAGCTTTGGCCGCCGTCGCATCTATGTGACTGGTGCGTT GATTGGAGCGGTGAGTGCCGTGCCATTCTTTATGGCGTTGGAAAGCCATAACACGCTGATGATTCTGTTCTTTGCCATCA TGCTGGCGAATGCTGCTCACGATATGATCGTTAGCGTACAGCAACCGATGTTTACCGAGCTATTTGGTACGGCGTATCGC TATAGCGGGGCTGGCGTGGGTTATCAGGTTGCCAGCGTGGTCGGCGGCGGGTTTACGCCTTTTATCGCTGTTCTGCTGGT GGAATTCATGGATGGCTCATGGCACGCGGTGGCGGCCTACCTTGCCATCGGCTGCTTACTGTCTGCGATTGTCGGGATGC AGATGAAAGCAAAATCGGCGGATGACTTACCTCGTTGA Protein sequence : MDTSTTPTLSQPGGSLPHQDDSLPSDKTLQTQLESHSQHRAKRAAWGSFVGAVVDWYDFLLYGIVAALVFNTEFFPQVSP TMGTLAAFGTFGVGFLFRPLGGMVFGHFGDKLGRKRMLMITVWMMGISTALIGLLPSFDSIGWWAPVLLVMLRAIQGFAV GGEWGGAALLAVESAPKKKKAFYSSGVQVGFGVGLLLATGSVSVVSNLTTNEEFTNWGWRLPFLFSLILVAIAWWVRNGM DESQEFEANKTLGDRAKKLRSFPIMDALRQHPKAFLLIIALRLGELLTMYIVTAFALNYSTTHLGLSRDIFLNIGLLVGA ISCVSIPFFAYLADSFGRRRIYVTGALIGAVSAVPFFMALESHNTLMILFFAIMLANAAHDMIVSVQQPMFTELFGTAYR YSGAGVGYQVASVVGGGFTPFIAVLLVEFMDGSWHAVAAYLAIGCLLSAIVGMQMKAKSADDLPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 4e-139 | 72 |
