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Name : lolD (Pecwa_2784) Accession : YP_003260144.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Resistance Product : lipoprotein transporter ATP-binding subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 3046420 - 3047127 bp Length : 708 bp Strand : - Note : outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone DNA sequence : ATGAGTGATTTATCATTATTGCAGTGTACTAACCTGTCCAAGCGTTATCAGGACGGCAAGTTGTCTACCGACGTGCTGCG CGATGTCTCTTTTGAGATGAGCAGCGGCGAGATGATGGCGATAGTCGGAAGCTCTGGCTCGGGCAAAAGTACGTTGCTGC ATGTGCTGGGGGGATTAGATACGCCAACGTCAGGCGAGGTTATCTTCAAAGGCCAACCGTTGAGCACGCTTTCGGCGGCG GCAAAAGCAGATTTGCGCAATCGCGAGCTGGGCTTTATTTATCAATTCCATCACCTGCTGCCGGATTTCACCGCGCTGGA AAACGTGGCAATGCCGCTGCTGATTGGCAAAGTACCCACGTCACAGGCACAAGATAAAGCGCGCGAAATGCTGGCCGCCG TCGGGCTGGATGCGCGCAGCCACCACCGTTCGTCCGAACTGTCTGGCGGTGAGCGGCAGCGTGTCGCTATTGCCAGAGCA TTGGTCAACAGCCCGTCGTTGGTGCTGGCGGATGAACCGACCGGTAACCTCGATCAGCGCACAGCAGATACTATTTTTGA ACTGCTGGGAGAACTGAATGTTCGGCAGGGTACCGCCTTTCTGGTGGTGACGCATGACCTGCAACTGGCTGGCCGACTGA ACCGCCAACTGGAAATGCGTGACGGTCAACTGCAGCAGGAACTGACCCTAATGGGAGCGCGGCAATGA Protein sequence : MSDLSLLQCTNLSKRYQDGKLSTDVLRDVSFEMSSGEMMAIVGSSGSGKSTLLHVLGGLDTPTSGEVIFKGQPLSTLSAA AKADLRNRELGFIYQFHHLLPDFTALENVAMPLLIGKVPTSQAQDKAREMLAAVGLDARSHHRSSELSGGERQRVAIARA LVNSPSLVLADEPTGNLDQRTADTIFELLGELNVRQGTAFLVVTHDLQLAGRLNRQLEMRDGQLQQELTLMGARQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-30 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lolD | YP_003260144.1 | lipoprotein transporter ATP-binding subunit | NC_012469.1.7686878. | Protein | 2e-42 | 46 |
| lolD | YP_003260144.1 | lipoprotein transporter ATP-binding subunit | NC_008702.1.4606598. | Protein | 5e-38 | 45 |
| lolD | YP_003260144.1 | lipoprotein transporter ATP-binding subunit | NC_012469.1.7686946. | Protein | 2e-22 | 41 |
