Gene Information

Name : Pecwa_2872 (Pecwa_2872)
Accession : YP_003260230.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 3131759 - 3133183 bp
Length : 1425 bp
Strand : +
Note : TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: eca:ECA2762 hypothetical protein

DNA sequence : 
TTGAGATATCTCCAAGACCGTTTCATGAAAAAATTAAAAGATACAGACTGGTATAAAAAGCGTTACTCCAACCGCGTTCT
CTTCTGGAGAGAAATATCACCACTCGCCTTCCCTATCTTTATTGAAGGCCTCTGCGTCGTGTTGATGGGAGTTTTCAGTA
CGTTCCTGGTCAGTTGGCTGGGAAAAGAGGCCATGGCGGCCGTCGGTCTGGCTGATAGCTTCAACATGGTCATCATTGCG
TTCTTCACTGCGGTCGCATTGGGGACCGCAGTTGTTGTTGCTTTCAGTCTGGGGCAACGCAATAGAAAGCAGGCACGTTC
TGCCGCTCGCCAATCAATGTCATTACTGGTTTTGTCATCGTTTCTGTTGGTCGCGCTGGTTGAATTTGCTGGTTCAGCAA
TCATCAATCTGATCGCAGGACAGGCCGATGAGCAGGTTAAAACGCTGGCTCTCACGTTCCTTCGCTGGACAGTGTGGGGA
TATCCTGCTGTCGCTATCGCGTTAGTCGGTTGCGGCGCGCTCCGGGGCGCGGGGAATACCAAGTTACCCATGGTCATCAA
TATTGGGATGAACATCCTCAATATTGCCATCAGTAGCCTACTGATTTACGGGGCATTCTCCTGGGATGGACTCGGTTTTA
TCGGTGCAGGCATCGGAATTACCATTTCACGCTATATCGGAGCGATACTCGTGATTCTGACGCTGATGCACGGTTTTAAC
GGTGCGCTGCGCATACCCTTCAGGTCTTACTTTGCACCTTTTACCGTATCGATTCTCTACGAGGTGCTCAGCATCGGGAT
CCCCGCCAGCATCGAATCCGTGATGTTTAATATCGGTAAACTCATCACCCAACGTTTTGTGGCAGGCATGGGGACCGAAG
TGATTGCCGGCAACTTTATTGCTTTCTCCATCTCGACGCTGATTAACCTGCCCGGCAATTCGCTCGGCGCAGCCGCCACG
ATTATTGTTGGTACACGGCTGGGGAAAGGTCAGATCATGCAGTCCACTCGTCAGCTAAAACACATTTTCTGGCTATCCAA
CATTGGGCTGTGTGCTCTTGCCGTACTTTCGGTCCCTAGCGCTAGCTTTTTGGCATCGTTTTACACCAATGAACCGGAAG
TGATCGACGTAGCAAAACACCTCCTGTGGCTTAATGCGCTATTTATGCCAATCTGGGCGGCATCGTGGGTATTACCCGCC
GGGCTGAAAGGGGCGAAGGATGCCAGCTACACCATGTGGGTAGCGATGGCGGGCATGTGGGGATGTCGGGTCATCGCAGG
ATACATCCTCGGCGTGATGCTCGGCTTTGGCGTGATCGGCGTGTGGATGGGTATGTTCTTTGACTGGATTGTGCGCGGAT
TCTTCTATTACCGCCGACTGATGAGCGGCCGCTGGCTATGGCGCTATCGTTCACCGACAGATTGA

Protein sequence : 
MRYLQDRFMKKLKDTDWYKKRYSNRVLFWREISPLAFPIFIEGLCVVLMGVFSTFLVSWLGKEAMAAVGLADSFNMVIIA
FFTAVALGTAVVVAFSLGQRNRKQARSAARQSMSLLVLSSFLLVALVEFAGSAIINLIAGQADEQVKTLALTFLRWTVWG
YPAVAIALVGCGALRGAGNTKLPMVINIGMNILNIAISSLLIYGAFSWDGLGFIGAGIGITISRYIGAILVILTLMHGFN
GALRIPFRSYFAPFTVSILYEVLSIGIPASIESVMFNIGKLITQRFVAGMGTEVIAGNFIAFSISTLINLPGNSLGAAAT
IIVGTRLGKGQIMQSTRQLKHIFWLSNIGLCALAVLSVPSASFLASFYTNEPEVIDVAKHLLWLNALFMPIWAASWVLPA
GLKGAKDASYTMWVAMAGMWGCRVIAGYILGVMLGFGVIGVWMGMFFDWIVRGFFYYRRLMSGRWLWRYRSPTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-123 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2872 YP_003260230.1 hypothetical protein BAC0146 Protein 7e-132 67