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Name : Hneap_2184 (Hneap_2184) Accession : YP_003264047.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2348588 - 2350450 bp Length : 1863 bp Strand : + Note : TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: noc:Noc_2350 preprotein translocase subunit SecD DNA sequence : ATGAATCGTTATCCGTGGTGGAAAAACCTGCTGATTATCCTGGTGCTTTTGCTGGGCATTTTCTTCGCATTACCCAATAT ATACGGTGAGAATCCGGCACTGCAAATTTCCAAGCGCAATGCCGTCATGGATCAGGCCGCCGTTGATAAGGCAGTGGCCG CACTCAAGGCCGCCAACATCCCCGTCAAAAGCGCCCGCCTCGAAGACAAGGACGGCTTGATCCAGTTCACCTCCACAGAT GCGCAGCTCAAAGCGGTCAATGTCGTGCGCGAAGCACTGGGTGAAAATTATCCGGTAGCACTAAACCTCGCCCCAGCAGC ACCACGCTGGATGCAGAACCTAGGCGCCAAGCCAATGTATTTGGGGCTCGATTTGCGCGGTGGTGTGCACTTTTTGATGC AAATTGACATGCAGGCCGCCATCAAGACCGCGCTGGAGCGGCGGGTTGATGGCATGCGCGGCGACCTGCGTCAGGCAAAC ATCCGCTATGTGGCCGCCGATGTTGAAAATGGCGACGAAATCGCCCTGCGATTCCCGGACGCCGCGGCCCGCGATGCCGC ACTCAAATCCATGGCTGGCAACTACCCCGAGCTGAAATTCAGTACCGATGAACGCAACGGTCAGCCTTTCCTTACAGCCA AATTCACGGATGTCGGCGCCACCGCCGAGCGCAAGGCAGCCGTGGACCAGAACATCACCACTCTGCGCAATCGCGTCAAC GAACTGGGGGTCGCCGAACCGCTGATTCAGCAGCAGGGCGATGACCGAATCGTGGTCGAACTGCCCGGCATTCAGGACAC GGTTCGCGCCAAGGAGATCATTGGTGCTACCGCGACACTGGAATTCCGACTTGTCTCCGGTACACCGACTGATTGGGTCG ATGCCGAGCAGAGTGGCCGCGTGCCGCCGGATGCGCGGCTCTATCACGAAAAAGATGGCCGACCAGTTCTGCTCAAGCGC CAGGTCATCGTGACCGGCGACCGCATTACGGGCGCTTCATCCGGCTTCGACCAACGCTCGGGCTCACCGGCCGTATTCGT GAATCTGGATGGCCAAGGTGCGCGCCGAATGGCCGATATTACCGGTCAGAACATCGGCAAGCAGATGGGCGTGGTGTTCA TCGAGCATCGTACCGAAACGAAGATAGTTGATGGCAAGCCAGTCAAAGACAAAAAGGTCATTCAGCAGGTGATCAACGTC GCCACCATTCAGGATCAGCTCGCCAATCGTTTCCAGATTACGGGCCTCGACTCGCCAGAAGAAGCGCGCGACCTAGCTCT GCTGTTGCGGGCCGGTGCGCTGCGTGCGCCGATGGATATCGTGGAAGAACGCACCGTAGGCCCAAGCTTGGGTGCGCAAA ACATCCAGTCGGGCGTCAATGCGTCGATTTTGGGCTTCGCACTGGTCGCCGTATTCATGCTGATTTACTACCGCGTGTTC GGCGTGACTGCAATCGTTGCCTTGGGTGTCAACCTGATCCTGATCGTCGCCGTGCTCTCGATGTTGCAGGCCACGCTGAC CTTGCCCGGTATTGCGGGGATGGTGCTGACGCTGGGTATCGCGGTGGATGCCAACGTGCTGATCAACGAGCGCATTCGTG AAGAACTGCGCAACGGCCTAACGCCCCATGCCGCCATCAAGGCGGGGTATGAGCGCGCCTTCGCCACCATTATCGATTCG CACGTAACTACCCTGCTCGCCGCCATCGTGCTGTTTGCGCTGGGAGCGGGCGCGGTGAAGGGATTTGCCGTCACGTTGAC AATCGGGATTCTGGCCTCGCTCTTTACCGCAATCATGGTCACGCGTGCACTGGTGAACCTGATTTACGGTCGCCGCGTAC GTCTGAACAAGATATCTATTTAA Protein sequence : MNRYPWWKNLLIILVLLLGIFFALPNIYGENPALQISKRNAVMDQAAVDKAVAALKAANIPVKSARLEDKDGLIQFTSTD AQLKAVNVVREALGENYPVALNLAPAAPRWMQNLGAKPMYLGLDLRGGVHFLMQIDMQAAIKTALERRVDGMRGDLRQAN IRYVAADVENGDEIALRFPDAAARDAALKSMAGNYPELKFSTDERNGQPFLTAKFTDVGATAERKAAVDQNITTLRNRVN ELGVAEPLIQQQGDDRIVVELPGIQDTVRAKEIIGATATLEFRLVSGTPTDWVDAEQSGRVPPDARLYHEKDGRPVLLKR QVIVTGDRITGASSGFDQRSGSPAVFVNLDGQGARRMADITGQNIGKQMGVVFIEHRTETKIVDGKPVKDKKVIQQVINV ATIQDQLANRFQITGLDSPEEARDLALLLRAGALRAPMDIVEERTVGPSLGAQNIQSGVNASILGFALVAVFMLIYYRVF GVTAIVALGVNLILIVAVLSMLQATLTLPGIAGMVLTLGIAVDANVLINERIREELRNGLTPHAAIKAGYERAFATIIDS HVTTLLAAIVLFALGAGAVKGFAVTLTIGILASLFTAIMVTRALVNLIYGRRVRLNKISI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-116 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 7e-116 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-116 | 47 |
