Gene Information

Name : Hoch_5815 (Hoch_5815)
Accession : YP_003270184.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 7987624 - 7987923 bp
Length : 300 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: maq:Maqu_1233 microcompartments protein

DNA sequence : 
ATGGCTGACGCCCTGGGAATGATCGAAGTCAGAGGCTTCGTCGGCATGGTCGAGGCCGCCGACGCCATGGTCAAGGCCGC
CAAAGTCGAACTGATCGGCTACGAGAAGACCGGCGGCGGCTACGTCACCGCCGTGGTCCGCGGCGATGTCGCCGCGGTCA
AGGCCGCCACCGAGGCCGGCCAGCGCGCGGCCGAGCGCGTCGGCGAAGTCGTCGCCGTGCACGTCATCCCGCGCCCGCAC
GTCAACGTCGACGCGGCGCTGCCCCTGGGCCGCACCCCGGGGATGGACAAGAGCGCGTAG

Protein sequence : 
MADALGMIEVRGFVGMVEAADAMVKAAKVELIGYEKTGGGYVTAVVRGDVAAVKAATEAGQRAAERVGEVVAVHVIPRPH
VNVDAALPLGRTPGMDKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-15 61
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 60
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hoch_5815 YP_003270184.1 microcompartments protein VFG1597 Protein 2e-15 61
Hoch_5815 YP_003270184.1 microcompartments protein VFG1596 Protein 6e-15 60
Hoch_5815 YP_003270184.1 microcompartments protein VFG1598 Protein 4e-15 55