|
Name : CtCNB1_1955 (CtCNB1_1955) Accession : YP_003277997.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2213345 - 2213785 bp Length : 441 bp Strand : + Note : COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit DNA sequence : TTGCAGGGCTGGTTGCGCCGAAAGGTCGGCAATGCCTTTGACGCAGCAGATCTGACTCAAGACACTTTTGTCCGTATCCT GGGCGTGCGTGAGCCGCCGCGTCTAGAGTCGCCGCGTGCTTATCTGACCACCGTGGCCAAAGGGGTGCTTGTCAACTGGT GCCGGCGGCAGGCGCTGGAGCGTGCCTATCTGGAGGCTCTGGCCCTGTTGCCGGAACCTGAAGCACCGTCGCCGGAGCAC CGGGCCCTGGTGCTGGAGGCCCTGCATGAGATAGATGCCATGCTTGATGCCTTGCCGCCGCTGGTACGGCGCACTTTTCT GCTTTCGCAGCTCGAGGACATGAAGTACGACGATATCGCCTCGCAGCTGGGCGTATCGCTGACCAGCGTCAAGCGCTACA TGGCCCTGGCTTTCAGGCAGTGTCTGGCGTTGATGGAATGA Protein sequence : MQGWLRRKVGNAFDAADLTQDTFVRILGVREPPRLESPRAYLTTVAKGVLVNWCRRQALERAYLEALALLPEPEAPSPEH RALVLEALHEIDAMLDALPPLVRRTFLLSQLEDMKYDDIASQLGVSLTSVKRYMALAFRQCLALME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 3e-21 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CtCNB1_1955 | YP_003277997.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 1e-21 | 51 |
