Gene Information

Name : CtCNB1_3689 (CtCNB1_3689)
Accession : YP_003279731.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4148698 - 4149222 bp
Length : 525 bp
Strand : -
Note : COG1595, RpoE, DNA-directed RNA polymerase specialized sigmasubunit

DNA sequence : 
GTGCCTACCCACGCCAACAGCATCGCCAGTGAAGCACTTGGCAGCATGTACACACTGCACAACCGCTGGCTGATCTCCTG
GCTGCAGCGCAAGCTTGGCAACCGTTGTGATGCGGCAGACATTGCGCAGGACACATTCACGCGCATTTGGACAACTGCCA
GAACGCAAGCAATCGAAGACATCAGAGAGCCCAGGGCTTATCTGACAATCGTCGCCAGGCGATTGATGATCAATCACCTG
GAACGGCGCTCGCTCGAACAGGCATATCTTGCCTCCTTGCATCTATTGCCTGAAGCCACCGCGCTCTCGGCGGAGGCTAG
AGCCATCTTGCTGGAGACCCTGGAAGAGCTGGATGCATTGCTGGGAGAGCTTCCAACGAAAGTTCGCACCGCATTCCTGC
TTTCACAGCTCGAAGGGCTTGCTTATGAGGAGATCGCCACGCAGATGCAAGTAAGCGTGCGTACGGTCACCCGCTATATG
GCGCAAGGCTTCCGGCAGTGCCTGCGCGTAATGCTGGACGCCTGA

Protein sequence : 
MPTHANSIASEALGSMYTLHNRWLISWLQRKLGNRCDAADIAQDTFTRIWTTARTQAIEDIREPRAYLTIVARRLMINHL
ERRSLEQAYLASLHLLPEATALSAEARAILLETLEELDALLGELPTKVRTAFLLSQLEGLAYEEIATQMQVSVRTVTRYM
AQGFRQCLRVMLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-29 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_3689 YP_003279731.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 1e-29 46