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Name : CtCNB1_4738 (CtCNB1_4738) Accession : YP_003280780.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 5291679 - 5293577 bp Length : 1899 bp Strand : - Note : COG0342, SecD, Preprotein translocase subunit SecD DNA sequence : ATGAACCGATACCCGGTCTGGAAGTACGCGATCATCGTGATCGCGCTGCTGGTGGGGGTGCTCTACACCCTGCCCAATTT CTTTGGTGAAGCGCCTGCCGTGCAGGTGTCCTCGGCCAAGTCCACCGTCAAGGTGGACAACGCGGTGCTGCAAAAGGTGG AGTCCGCCTTGAGCGCGGCCAGCGTCAAAGCCACTTCGATGTCTCTGGAAGGCACTTCGGTGCGCGCCCGCTTCGATACG CCCGATGAGCAGCTCAAGGCCAAGGACGTCATCCAGAAGGCGCTGATCTCCGACCCCACCGACCCCTCCTACATCGTGGC GCTGAACCTGGTGTCGCGCTCGCCCGACTGGCTGACGGCCATCGGCGCCAAGCCCATGTATCTGGGTCTGGACCTGCGCG GCGGCGTGCACTTCATGCTGCAGGTGGACATGGCGGCGGCCCTGACCAAGAAGGCCGAGAGCTATGCGGGCGATCTGCGC TCTTCGATGCGCGACAAGAATATCCGCCACGGCGGTGTCAGCCGCGACGGCAACAACGTCACCATTCGCGTGCGCGACGA AGCCACGCTGACGGCGGCGCGCAATCTGATCGCGGACCAGTTCCCCGATCTGGCGGCCACTTCCATGCCTGACGGCACGG GCTTCAAGCTGGTGGCCTCGATCAAGCCCGAAGCCCTGCGCAAGGTGCAGGAGCAGGCGCTCAAGCAGAACATCGTCACG CTGCACAACCGTATCAACGAACTCGGCGTAGCCGAGCCCGTGATCCAGCAGCAGGGCCTGGACCGCATCGTGGTGCAACT GCCCGGCGTGCAGGACACGGCCAAGGCCAAGGACATTCTGGGCCGCACCGCCACGCTGGAAGTGCGCATGGTGGACGAGT CCGCCGAAGCGCGTGCTGCCGAGATGGGCTCCGGCCCCGTGCCTTTCGGCTCCGAGAAGTATCTGGACCGCAACGGTCAG GGCATCATCGTGCAAAAGCAGGTGACGCTGACCGGCGAGAACCTGACGGATGCCCAGCCCGGTTTTGACAGCCAGACCCA GGAGCCCACCGTCAACCTGACGCTGGATGCCAAGGGCGCGCGCATCTTCAAGGACGTGACGCGCGAGAACGTGGGCAAGC GCATGGCCATCATCCTGTTCGAAAAGGGCAAGGGCGAGGTGGTCACGGCTCCCGTGATCCGTGGCGAAATCGGCGGCGGC CGCGTGCAGATCTCGGGTCGCATGACTACGGCGGAAGCCAACGACACTTCGCTGCTGCTGCGCGCCGGCTCCCTGGCCGC GCCCATGGAAATCATCGAGGAATACACCATCGGCCCGAGCCTGGGCGCCGACAACATCAACCGCGGTATTCACTCCGTGG TCTGGGGCATGGTGGCGATTGCGGCCTTTATGTGCATGTACTACATGCTGTTCGGCGTGTTCTCCACGATTGCTCTGTCG GTGAACGTGTTGCTGCTGCTGGCCATTCTGTCCATGCTGCAGGCCACGCTGACCCTGCCCGGCATTGCCGCCATGGCGCT GGCGCTGGGCGTGGCCATCGACTCGAACGTGCTGATCAACGAGCGTATTCGTGAAGAGCTGCGTGCCGGTGCTTCGCCTC AGGCGGCCATCCATGCAGGCTACGAGAACGCCTGGCACACCATTCTGGACTCCAACGTGACCACGCTGATCGCCGGCCTG GCCCTGCTGGCCTTCGGTTCGGGCGTGGTGCGCGGCTTTGCCGTGGTGCACTGCATCGGCATTCTGACCAGCATGTTCTC TGCAGTGTTCTTCTCTCGCGGGCTGGTCAACCTCTGGTATGGCGGCAAGAAGAAGCTCAAGAGCGTCTCCATCGGTCAGG TCTGGAAGCCTGAGGGTGAGGGTCACCGTTCCGTGGCCGGTCGCGGCAGCAACAACTAA Protein sequence : MNRYPVWKYAIIVIALLVGVLYTLPNFFGEAPAVQVSSAKSTVKVDNAVLQKVESALSAASVKATSMSLEGTSVRARFDT PDEQLKAKDVIQKALISDPTDPSYIVALNLVSRSPDWLTAIGAKPMYLGLDLRGGVHFMLQVDMAAALTKKAESYAGDLR SSMRDKNIRHGGVSRDGNNVTIRVRDEATLTAARNLIADQFPDLAATSMPDGTGFKLVASIKPEALRKVQEQALKQNIVT LHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKDILGRTATLEVRMVDESAEARAAEMGSGPVPFGSEKYLDRNGQ GIIVQKQVTLTGENLTDAQPGFDSQTQEPTVNLTLDAKGARIFKDVTRENVGKRMAIILFEKGKGEVVTAPVIRGEIGGG RVQISGRMTTAEANDTSLLLRAGSLAAPMEIIEEYTIGPSLGADNINRGIHSVVWGMVAIAAFMCMYYMLFGVFSTIALS VNVLLLLAILSMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRAGASPQAAIHAGYENAWHTILDSNVTTLIAGL ALLAFGSGVVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGGKKKLKSVSIGQVWKPEGEGHRSVAGRGSNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 41 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-99 | 41 |
