Gene Information

Name : VEA_002843 (VEA_002843)
Accession : YP_003285470.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 1371115 - 1371858 bp
Length : 744 bp
Strand : +
Note : desc: heme lyase for CcmE

DNA sequence :
ATGTGGAAATGGCTACATCCTTATGCCAAGCCAGAAACCGCTTACCGTTTGAGTGGTAAGTTTCTGCCTTGGTTTTCTGT
ATTGGCCCTCGTATGCTTATCGGTTGGTACGGTTTGGGGGCTTGCATTTGCGCCTTCAGATTACCAACAAGGTGACAGTT
TCCGAATCATCTACATTCATGTCCCATCAGCTATTTGGTCTATGGGCGTTTATATGTCGATGGCGATTGCGGCATTTATT
GGCTTAGTATGGCAAGTACGTCTATCTGATATGGCGGCGCTTGCGATGGCGCCGATTGGTGCGGTATTTACCTTCATTGC
TCTACTTACTGGTGCCGTTTGGGGTAAGCCAATGTGGGGCACTTGGTGGGTATGGGACGCCCGTCTTACTTCAGAATTGA
TTCTTCTATTTCTCTACCTTGGTGTTATTGCGCTTTATCACGCGTTTGACGATCAGAAAACAGCCGCAAAAGCGGCGGGT
ATTTTAGCGATCGTAGGCGTCGTGAACCTACCTATCATTCACTTTTCCGTAGAGTGGTGGAACACGCTTCACCAAGGCGC
GACGATCACGAAATTTGAACAACCTTCTATTTCATCCGACATGCTTTGGCCGTTATTGCTAAACATCTTTGGCTTTGCGT
TCTTCTTTGGTGCAGTGACGATGGTACGTTTTCGTAACGAAATCATCAGTAAAGAAAGTCACCGCCCTTGGGTGCGCAAA
CTCGCAACAGAACAAACTCAGTGA

Protein sequence :
MWKWLHPYAKPETAYRLSGKFLPWFSVLALVCLSVGTVWGLAFAPSDYQQGDSFRIIYIHVPSAIWSMGVYMSMAIAAFI
GLVWQVRLSDMAALAMAPIGAVFTFIALLTGAVWGKPMWGTWWVWDARLTSELILLFLYLGVIALYHAFDDQKTAAKAAG
ILAIVGVVNLPIIHFSVEWWNTLHQGATITKFEQPSISSDMLWPLLLNIFGFAFFFGAVTMVRFRNEIISKESHRPWVRK
LATEQTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 5e-47 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_002843 YP_003285470.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 1e-52 49