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Name : VEA_004365 (VEA_004365) Accession : YP_003286988.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3057318 - 3059141 bp Length : 1824 bp Strand : - Note : TC 3.A.5.1.1 DNA sequence : ATGGTATTTTTTGCCATCATCACCGCTGCGTTATACGCACTTCCAAATATCTACGGTGAAGATCCGGCTATTCAAGTTAC AGGGGCGCGTGGCGCCTCTGTAGATATGTCAACGCTGGATGCTGTCACTACTGCTCTTGATAAAGAGCAACTCTCTCATA AATCCATTGCTCTCGAAAATGGATCAATTCTTGTTCGTTTTAACGACACTGACACACAAATCAGTGCTCGTGATGTCATC AGCGAAGCGCTTGGCAAAGACACAATTGTTGCACTTAACCTTGCTCCTTCTACACCCGATTGGCTAGAAGCGATTGGCGC GTCACCATTAAAGCTGGGTCTTGACCTTCGTGGTGGTGTCCACTTCTTAATGGAAGTAGACATGGACGCGGCGATGGAAA AGCTCGTTGGTCAGCAAGAAGAAGCTTTCCGTAGCGAACTTCGTGAGGCAAAAATTCGTTATCGTGCTATTCGCCCTTCT GGCAAAGAAGCGGTAGAGGTTCTGCTACGTAACGAAGAGCAATTAGCAGAAGCGAAAGCAATGCTAGAAAAGAATCACCC GGACATGCTCTTTGTCGAATCTGATTCAAATGGCCGTTACGCTCTTACTGCGACCTTTACCGAGCAACGTTTACAAGAGA TCCGTAACTACGCTGTTGAGCAAAACATTACGATTTTACGTAACCGTGTAAACGAGCTAGGTGTTGCAGAGCCTCTCGTT CAACGTCAAGGTGCAAGTCGAATTGTTGTTGAGCTTCCTGGTGTTCAAGATACTGCTCGTGCAAAAGAGATTCTAGGTGC GACTGCAACGCTAGAATTCCGTGAAGTTGACGATAAAGCTGACCTATCAGCGGCGGCAAATGGTCGTGCGCCAGCAGGCA GTGAAATCAAAATGGACCGAGACGGTCGTCCGGTTGTGCTTAAGAAGCGTGTTATTCTTGGTGGTCAAAGCATTACGGAT GCAAGCTCAAGTGTCGATGAATACGGTCGTCCACAAGTTAACATCTCGCTAGACAGCGAAGGTGGTAACAAGATGTCAGC GTTCTCTAAGAAGAACATCGGTAAGCTAATGGCTACCGTGTTTGCTGAGTACAAAGACAGTGGTCGTCGTACGCCAGAAG GCAAAGTCATCCTAGATAAGCATGAAGAAGTCATCAACCAAGCGACGATTCAATCGGCTCTTGGACGTAACTTCCGTATC ACGGGTATAGACTCCGCAGCTGAAGCGCACAACCTTGCACTTCTATTACGTGCTGGTGCACTGATCGCACCTATCTCTAT CGTTGAAGAGCGTACTATTGGTCCATCAATGGGCCAGCAAAACATCGATATGGGTATCCAAGCGTGTATCTGGGGTATGG TTGCGGTAATGCTGTTTACACTGCTTTACTACCGTGGCTTTGGCTTGATTGCCAACATCGCTCTAATGGCTAACTTAGTG TTGATCATTGGTGTGATGTCGATGATTCCAGGCGCTACCATGACGCTTCCGGGGATTGCCGGTATCGTGTTAACAGTCGG TATGGCGGTTGATGCGAACGTACTGATCTTCGAGCGTATCCGTGAAGAGCTTCGCGATGGGCGTAGTCCACAACAAGCGA TTCACCAAGGTTACGCGAATGCATTCAGTACGATTGCCGATGCGAACATCACGACACTGATTACTGCAATTATCCTATTT GCAGTCGGTACTGGTGCAGTGAAAGGTTTCGCGGTTACTCTATCTATCGGTATCTTAACTTCAATGTTCACCGCCATTAT TGGTACACGTTGTATCGTGAACCTGATTTACGGTGGCAAACGCGTTGATAAATTGTCGATCTAA Protein sequence : MVFFAIITAALYALPNIYGEDPAIQVTGARGASVDMSTLDAVTTALDKEQLSHKSIALENGSILVRFNDTDTQISARDVI SEALGKDTIVALNLAPSTPDWLEAIGASPLKLGLDLRGGVHFLMEVDMDAAMEKLVGQQEEAFRSELREAKIRYRAIRPS GKEAVEVLLRNEEQLAEAKAMLEKNHPDMLFVESDSNGRYALTATFTEQRLQEIRNYAVEQNITILRNRVNELGVAEPLV QRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLSAAANGRAPAGSEIKMDRDGRPVVLKKRVILGGQSITD ASSSVDEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGRRTPEGKVILDKHEEVINQATIQSALGRNFRI TGIDSAAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTLLYYRGFGLIANIALMANLV LIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRSPQQAIHQGYANAFSTIADANITTLITAIILF AVGTGAVKGFAVTLSIGILTSMFTAIIGTRCIVNLIYGGKRVDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-116 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 49 |
