Gene Information

Name : VEA_000450 (VEA_000450)
Accession : YP_003287603.1
Strain :
Genome accession: NC_013457
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 515267 - 517330 bp
Length : 2064 bp
Strand : +
Note : -

DNA sequence :
GTGGACATTCTTGCTCGTCGCCGTAAAAACAACCCTATTGCTGTTGGTGAACCGGGCGTTGGTAAAACCGCAGTAGTAGA
AGGTTTGGCACTTAAGATTGTACAAGGTGACGTACCAGACAACCTCAAAGGTGTTGAGCTTTACGGGCTAGATATGGGTC
TTCTGCAAGCTGGTGCAAGCGTAAAAGGTGAATTCGAAAAACGCCTAAACGCGGTATTGGATGAAGTGAAAAACTCGCCA
ACCCCTATCATTCTTTTCATCGATGAAGCACACACCCTTGTTGGCGGTGGTAACCAAGCGGGCGGCAGCGACGCGGCAAA
CTTGCTAAAACCAGCCCTAGCGCGTGGTGAAGTGAAAACCATCGCTGCGACAACATGGTCGGAATACAAGAAGTACTTCG
AGAAAGATCCTGCCCTTGCACGTCGTTTCCAATTGGTGAAACTCGACGAACCATCTCCTGAACAAGCAGCATTGATCATT
CGTGGTCTGCGCCCAGCATACGAGAAGTCACACAACGTTTACGTGCGTGATGACGCCATCACTGCTGCGGCAGCGCTTTC
TGCTCGTTACATCTCTGGCCGTCAACTGCCAGACAAAGCGATCGATGTACTAGATACGGCGTGTGCACGAGTGAACATCA
GCCTTAATGCCATTCCTGCTTCTGTAGAGACACTGCAACAAGAACTTGCAGCTCAACAGCGCGAGCTTGAAGCACTTGAG
CGTGATGCTCTGCAGCAAACTGGCGACAAGCACAGCCTTGCTAACATTCCAGACCTAGAACTGGCAATGGAAACAACGAA
AGAAGAGCTAGCAGAACAAGAAGCGCAATGGCACAAAGAAAAAGAGCAGATCCAAGAGATGATTGCTCTACGCTCTCGCT
TGCATGAGCTGGTGTTTGGCGAAACAAATGAAGAAGAGCTTGTTGCAGAAGAAGATTCAGAACAAGAGCAAGACGTTTCT
CCATATGCAGAGATGGATGAAGAAGCCGTTCGCATTGCAATTTCGGCCTGCCAGGAACAGCTAGACGCAATCCGCAATGG
CAACCCATTGGTTCACTTTGAAGTTGGTCCAGATGAAGTTAGCCACGTGATCTCGGACTGGACTGGTATTCCAATGGGTA
AGATGCTTCAAGACGAAGCAGAAACCACGCTAAAACTGAAAGAAAGCCTAACACAGAGCATCAAAGGCCAAGAATACGCT
ATCGATGCACTGTCTGAAGGCATTCAAACCGCAAAAGCAGGCCTAGGCAACCCAGACGCACCGACGGGCGTATTCCTACT
GGTTGGCCCAAGTGGTGTGGGTAAAACCGAAACGGCTCGTTCGATCGCTGATCAAATGTTTGGTGGTGAGCGCTTTATGA
CGACCATCAACATGTCTGAGTTCCAAGAGAAGCACACGGTATCTCGCCTAATTGGTTCACCTCCGGGTTACGTAGGTTAC
GGTGAAGGCGGCATGCTGACAGAAGCGGTACGTCAGCGTCCATACTCTGTTGTACTTCTTGATGAAGTAGAAAAAGCCGA
CCCAGAAGTGTTGAACCTATTCTACCAAGTGTTCGACAAAGGTACGCTGAACGACGGCGAAGGCCGAACCATCGATTTCA
AGAACACGCTGATCATCATGACCAGTAACCTTGCGACGCACGAGATTGAATCTTTGGTTCATCAATCCAAAGACATTGAT
GCAAACATCATCGCAGAAGCTATCCGCCCTACTTTGAACCAACACTTCAAACCGGCGCTGTTGGCACGTATGTCGGTACT
GCCATTTGTTCCGCTTTCTGATGAAGCGATGACAGAAATCATTCACCATAAGCTGAACAAAGTTTCTCAGCGTCTACAGA
GCCATCACAAGTTGTCTCTGAGCTACGAAGAAAGCTTGGTTGAGTTCGTACTAGGCAACTGTCGCCTTGCTGAAACGGGC
GCGCGTAACATTGACGCGGTAATCAACCGTCAGTTACTGCCTCAGCTATCGACTCAACTATTAGTGCATGACAAGGATGA
TTCACATACGCAAATCGAAGTGTCTGTCGATGAGCAAGGAACACTAACCTATGCGTTCAGCTAA

Protein sequence :
MDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVQGDVPDNLKGVELYGLDMGLLQAGASVKGEFEKRLNAVLDEVKNSP
TPIILFIDEAHTLVGGGNQAGGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPEQAALII
RGLRPAYEKSHNVYVRDDAITAAAALSARYISGRQLPDKAIDVLDTACARVNISLNAIPASVETLQQELAAQQRELEALE
RDALQQTGDKHSLANIPDLELAMETTKEELAEQEAQWHKEKEQIQEMIALRSRLHELVFGETNEEELVAEEDSEQEQDVS
PYAEMDEEAVRIAISACQEQLDAIRNGNPLVHFEVGPDEVSHVISDWTGIPMGKMLQDEAETTLKLKESLTQSIKGQEYA
IDALSEGIQTAKAGLGNPDAPTGVFLLVGPSGVGKTETARSIADQMFGGERFMTTINMSEFQEKHTVSRLIGSPPGYVGY
GEGGMLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQVFDKGTLNDGEGRTIDFKNTLIIMTSNLATHEIESLVHQSKDID
ANIIAEAIRPTLNQHFKPALLARMSVLPFVPLSDEAMTEIIHHKLNKVSQRLQSHHKLSLSYEESLVEFVLGNCRLAETG
ARNIDAVINRQLLPQLSTQLLVHDKDDSHTQIEVSVDEQGTLTYAFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-140 51
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-140 51
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-127 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_000450 YP_003287603.1 ClpB protein VFG2084 Protein 3e-152 54
VEA_000450 YP_003287603.1 ClpB protein VFG2076 Protein 8e-147 50