Gene Information

Name : Rmar_0716 (Rmar_0716)
Accession : YP_003290002.1
Strain : Rhodothermus marinus DSM 4252
Genome accession: NC_013501
Putative virulence/resistance : Unknown
Product : class V aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 827760 - 828923 bp
Length : 1164 bp
Strand : -
Note : PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afw:Anae109_0637 aminotransferase class V

DNA sequence :
ATGCGCCGACCGGTTTATCTGGACTACAACGCCACGACCCCCGTCGATCCGCGGGTGCTGGAGCGCATGCTGCCGTACTT
TACCGAGCGCTTCGGCAATCCGGCCAGCAAGGGCCACACCTACGGCCTGGAAGCCGAAGCGGCCGTCGAGGTCGCCCGTG
AGCAGGTGGCGGCCCTGCTGGGGGCCGAGCCGGACAGCCTGATCTTCACCAGCGGCGCCACCGAAGCGCTGAACCTGGCC
ATCAAGGGGGTGGCCGAGGCTTCCCGACACCGGGGGCAGCATATCGTGACAGTCCAGACCGAGCACGCGGCCGTGCTCGA
AGCCTGCCGGGCCCTGGAACGCAGGGGCTGGCAGGTGACCTACCTGCCCGTCGATGCGCAGGGGCGGCTGGATCCGGACG
CGCTGGAGACGGCACTGACGCCGCAGACCGTCCTGGCGGCCGTCATGTGGGCCAACAACGAAACGGGCGTGCTGCATCCC
ATTGAGGAAGTTGCCCGACGCACGCAGGCCCACGGTGTGCCGCTCCTGGTCGATGCCACGCAGGCCGTGGGGAAGATTCC
GGTCTCGGTCGAGGGGATCGATCTGCTGGTCTGCTCGGCGCACAAGTTCTACGGCCCCAAAGGTGCCGGCGTGCTCTACG
TACGCCGTCGCCCGCCGCTGCGCCTGGTGCCCCTGCTGGACGGTGGCGGGCACGAGCAGGGGTTGCGCAGCGGGACGTTG
AATGTGCCGGCCATCGTCGGCATGGGAGCGGCCGCCGAACTGGCCGCCCGGGAAATGGCCGACGAAAGCCGCCGCCTGCG
ACACCTGCGCGATCGGCTGGAGCGGGAGCTGCAGGCTGCTTTGCCCGACGTCCGCATCAACGGAGCGCAGGCGCCACGGC
TACCCCAGACGAGCAGCGTCACGATCCCGGGCGTTCGGGCCGACCGCCTGCTGACCACCGTGCGCACGCTGGCACTTTCG
GCCGGCAGCGCCTGCGGTTCGGGTCGCGGCAAGCCCAGCCACGTGCTCCGCGCCATGGGTCTCAGTGAGGCCGAGGCGCA
ATGCACGATCCGCATCAGCCTGGGACGTTTCACCACCGAGGCCGACATCGACGAGGCCCTTGAACAACTAACGGCGGCCG
TACGTCGGCTTCGCCAGCGCTCCGTCGCCACGTCAACCACCTGA

Protein sequence :
MRRPVYLDYNATTPVDPRVLERMLPYFTERFGNPASKGHTYGLEAEAAVEVAREQVAALLGAEPDSLIFTSGATEALNLA
IKGVAEASRHRGQHIVTVQTEHAAVLEACRALERRGWQVTYLPVDAQGRLDPDALETALTPQTVLAAVMWANNETGVLHP
IEEVARRTQAHGVPLLVDATQAVGKIPVSVEGIDLLVCSAHKFYGPKGAGVLYVRRRPPLRLVPLLDGGGHEQGLRSGTL
NVPAIVGMGAAAELAAREMADESRRLRHLRDRLERELQAALPDVRINGAQAPRLPQTSSVTIPGVRADRLLTTVRTLALS
AGSACGSGRGKPSHVLRAMGLSEAEAQCTIRISLGRFTTEADIDEALEQLTAAVRRLRQRSVATSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 1e-55 46