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Name : secD (ETAE_0961) Accession : YP_003295017.1 Strain : Edwardsiella tarda EIB202 Genome accession: NC_013508 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1048801 - 1050657 bp Length : 1857 bp Strand : + Note : - DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGATCGTGGCGCTGGTCATCGGTCTGCTGTATGCGCTCCCTAA CCTTTATGGCGAGGATCCGGCTGTTCAAATCACTGGCGCGCGCGGTGTCGCCGCCAGTGAGTCAACACTGGTCCAAGTCC GTGATGTGCTTGAAAAACAGCATATCCCCAGCAAATCCATTGCGCTGGAAAATGGTGCCATTCTGGCACGCTTTACTGAT ACCGACATTCAGCTGCGGGCGCGCGAAGCGCTGGTCGATACGCTGGGTGATAAATATGTCGTCGCACTCAACCTGGCACC CGCTACCCCGAAGTGGCTGGCGATGGTCGGCGCCGAGCCGATGAAGCTGGGTCTTGACCTGCGCGGCGGCGTGCATTTCC TGATGCAGGTGGACATGGATACTGCGCTGAGCAAGCTGCAGGAACAGACCATGGATACCCTGCGCAGCGATCTGCGCGAC AAAGGCATTCCTTACTCTACCATTCGTAAGCTGCCCGATCCCGCCAGCGGAGGCGTGGAGATCAACTTCCGTGACGCCGC CGCCCGCGATGCGGCCAGCAATTACCTCTCTCCGCGCCACCGCGATCTGGTCTTCAGCAACGCCGGTGATACGACGCTGA AAGCGGTGATGACGGACGATCGCCTGCGTGAGGCCCGTGAGTATGCGGTGCAGCAGAACATCAACATTCTGCGTAACCGT GTGAACCAGCTGGGCGTTGCCGAGCCGCTGGTACAGCGCCAGGGCGCCGATCGTATCGTGGTTGAGCTGCCGGGTATCCA GGACACGGCGCGTGCCAAGGAGATTCTGGGTGCGACCGCGACGCTGGAGTTCCGTCTGGTCAACAGCAACGTGGATGCGC AGGCCGCCGCCAGCGGTCGCGTGCCGGGTGACTCTGAGGTCAAATATACCCGTGACGGCCGCCCGGTGGTGCTGTACAAG CGGGTGATCCTGACCGGTGACCACATCACTGACTCCACCTCCAGCCAGGATGAGTTTAACCGTCCGCAGGTTAACATCTC CCTCGACAGCGCCGGCGGCAGCGCCATGTCCAACTTCACCAAGGACAATATCGGCAAGCCGATGGCGACCCTGTTTGTGG AATATAAGGACAGCGGCAAGAAAGACGCCAGCGGCAAGCCGATCCTGGAGAAACAGGAAGAGGTGATCAACGTGGCGACG ATCCAGTCGCGCCTGGGTAACAGCTTCCGGATTACCGGCATCGATAACCCGGCTGAGGCCCGTCAGCTCTCTCTGCTGCT GCGCGCCGGTGCGCTGATTGCGCCGATCCAGATCGTGGAAGAGCGGACTATCGGCCCAACCCTGGGGATGCAGAATATTG AGCAGGGGCTCGAAGCCTGCCTGTGGGGCCTGGTCGCCTCTATCATCTTCATGGTGGTGTACTACAAGAAGTTCGGTCTG ATCGCGACCACCGCGCTGTTGGCTAACCTGGTGATGATCGTCGGGATTATGTCGCTGCTGCCGGGGGCCACGCTGACCAT GCCGGGCATTGCGGGGATCGTGCTAACCCTTGCGGTAGCGGTTGACGCCAACGTACTGATAAACGAGCGTATCAAGGAGG AGCTGCGCAACGGGCGAACCGTTCAGCAGGCGATCCATGAAGGCTATAAAGGCGCGTTTTCCAGTATTATCGATGCCAAC GTGACCACGCTGATTACCGCAGTGATTCTGTACGCCGTGGGCACCGGCTCCATCAAGGGCTTTGCCATCACCACCGCTAT CGGTGTGGCGACCTCGATGTTTACCGCCATTGTCGGTACCCGCGCCATTGTCAACCTGCTGTACGGCGGCAAGCGCATCA ACAAGCTGTCTATCTAA Protein sequence : MLNRYPLWKYIMLIVALVIGLLYALPNLYGEDPAVQITGARGVAASESTLVQVRDVLEKQHIPSKSIALENGAILARFTD TDIQLRAREALVDTLGDKYVVALNLAPATPKWLAMVGAEPMKLGLDLRGGVHFLMQVDMDTALSKLQEQTMDTLRSDLRD KGIPYSTIRKLPDPASGGVEINFRDAAARDAASNYLSPRHRDLVFSNAGDTTLKAVMTDDRLREAREYAVQQNINILRNR VNQLGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDAQAAASGRVPGDSEVKYTRDGRPVVLYK RVILTGDHITDSTSSQDEFNRPQVNISLDSAGGSAMSNFTKDNIGKPMATLFVEYKDSGKKDASGKPILEKQEEVINVAT IQSRLGNSFRITGIDNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLWGLVASIIFMVVYYKKFGL IATTALLANLVMIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRTVQQAIHEGYKGAFSSIIDAN VTTLITAVILYAVGTGSIKGFAITTAIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-128 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-128 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 9e-128 | 47 |
