Gene Information

Name : Smon_0563 (Smon_0563)
Accession : YP_003305919.1
Strain : Streptobacillus moniliformis DSM 12112
Genome accession: NC_013515
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 635995 - 636696 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_4268 ABC transporter-related protein

DNA sequence : 
ATGAGCTATATTAAAATTGAAAATCTAAAAAAAGTATATATAATTGGAGAAAATGAAATAATAGCAAATAATGATATAAA
TTTTGAGATAAATAAAGGTGAATTTGTTGTGATACTTGGTTCTTCAGGTGCTGGAAAATCAACTTTATTAAATATTTTAG
GTGGAATGGATGTAGCCGATTCAGGAAATATATTTATAGATAATAAAAATATTGCTAAATATACTAAAGAAGAATTAACG
AAATATAGAAGAAATGATGTAGGATTTGTATTTCAGTTCTATAATTTATTACCTAATTTAACAGCTAAAGAAAATGTTGA
ATTAGCTTCTGAATTGGTAGAAAAAGATATAGATATTATAGAAGTTCTTAAAGATGTTGGACTTGAAAATAGAATGAATA
ATTTTCCTTCACAATTATCAGGTGGTGAACAACAGAGGGTATCTATTGCAAGAGCTATTGCTAAAAGCCCTAAAATCTTA
TTATGTGATGAACCAACAGGAGCATTAGATTTTAATACAGGAAAACAAGTTCTTAATATATTATCAAATTTAAGTTCAAA
AAAGAATGTTACAGTAATTGTGGTTACACATAATTCTGAAATTGCAAAAATTGCTGATAAAGTAATATATATGCAAGATG
CTAAAGTAAAAGAAATATTAATAAATAAAAATAAATTAAATGTTTCTGAAATAAAATGGTGA

Protein sequence : 
MSYIKIENLKKVYIIGENEIIANNDINFEINKGEFVVILGSSGAGKSTLLNILGGMDVADSGNIFIDNKNIAKYTKEELT
KYRRNDVGFVFQFYNLLPNLTAKENVELASELVEKDIDIIEVLKDVGLENRMNNFPSQLSGGEQQRVSIARAIAKSPKIL
LCDEPTGALDFNTGKQVLNILSNLSSKKNVTVIVVTHNSEIAKIADKVIYMQDAKVKEILINKNKLNVSEIKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smon_0563 YP_003305919.1 ABC transporter NC_012469.1.7685735. Protein 8e-71 64
Smon_0563 YP_003305919.1 ABC transporter CP001581.1.gene598.p Protein 4e-41 44
Smon_0563 YP_003305919.1 ABC transporter NC_012469.1.7686878. Protein 9e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smon_0563 YP_003305919.1 ABC transporter VFG0869 Protein 5e-16 41