Gene Information

Name : Sked_25290 (Sked_25290)
Accession : YP_003315267.1
Strain : Sanguibacter keddieii DSM 10542
Genome accession: NC_013521
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2811781 - 2812509 bp
Length : 729 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGACCGCCGTCGTCTCGCTCCGGCAGGTCTCCCGGGAGTACCCGGGAGGTGTCCGTGCCCTGGACGGTGTCGACCTCGA
GGTGCAGCGCGGCGAGCTCGTCGCGGTGGTCGGCAGCTCCGGGTCGGGCAAGTCGACCATGCTCAACGTCATCGGCACGC
TCGACCGGTGCTCGTCCGGGACCGTCGCGATCGACGGCCACCTGGTCGAAGACCTCTCGGACCGTGACCTCTCAGCCCTG
CGGGCGACGCGGATCGGGTTCGTGTTCCAGCACTTCCACCTGTCGGCGGGCACTGCCGCGATCGACAACGTCGCGGACGG
GCTGCTGTACCGCGGGGTGCGGCGCGCCGAGCGGCGTGACCGAGCGGCGGCGGTCCTCGACCGCGTCGGGCTGGGCACGC
GCCTGGGGCACCGTCCGAACGAGCTGTCCGGAGGGGAGAAGCAGCGGGTCGCGATCGCGCGAGCCGTCGTCGGAGAACCT
CCGCTGCTCCTCGCGGACGAGCCGACGGGGGCGCTCGACTCCGTCTCGGGCGCCGGGATCGTCGAGCTCCTCCGCGAGCT
CAACACCGCGGGCACCACGATCGTCGTGATCACCCACGACCGGGACCTCGCCGCGATGCTGCCTCGGCAGGTCACGGTCC
GGGACGGGCGCATCGTGCCGCCCGAGCACCCGGAGGCGGTGCGGGCTGCACGCCCCGAGCGTCCTGCCCGGCCGGAGCAG
CCATGCTGA

Protein sequence : 
MTAVVSLRQVSREYPGGVRALDGVDLEVQRGELVAVVGSSGSGKSTMLNVIGTLDRCSSGTVAIDGHLVEDLSDRDLSAL
RATRIGFVFQHFHLSAGTAAIDNVADGLLYRGVRRAERRDRAAAVLDRVGLGTRLGHRPNELSGGEKQRVAIARAVVGEP
PLLLADEPTGALDSVSGAGIVELLRELNTAGTTIVVITHDRDLAAMLPRQVTVRDGRIVPPEHPEAVRAARPERPARPEQ
PC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sked_25290 YP_003315267.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-37 48
Sked_25290 YP_003315267.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-28 47