Gene Information

Name : Sthe_1110 (Sthe_1110)
Accession : YP_003319368.1
Strain :
Genome accession: NC_013523
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1217651 - 1219192 bp
Length : 1542 bp
Strand : -
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cau:Caur_1226 lysyl-tRNA synthetase

DNA sequence :
TTGATCGAGTTGAACGAACAGCAACGCCAGCGGCTGGAAAAGGCCGAAGCGCTTCGTGAGCAGGGTATCGATCCCTACCC
ACCTCACAGCCACCGCACCCACACGGCTGAGGAGGCGCTGGCGCGCTTCACCGAGATCGAGCCGACCCTGGACACCGAGC
ACGACCCCGAGACGATCACCGTTGCGGGCCGTGTGACTGCCGTGCGCGACATGGGAAAGTCCGTCTTCGCCCATATCCGC
GACGGGAGCGGCGCGATCCAGGTCTACCTGCGCCGAAACGTCGTGGGCGACGATGCGCTTGCCCACTTCAAGCGGTTCAT
CGACCTGGGTGACTTCATCGAGGCAGAGGGGAACCTCTTCCGCACCCGCACCGGTGAGGTGACGGTCGAAGTCAAGGCGT
TCAGGCTGCTGGCCAAGGCCATCAACCCGCCGCCGGAGAAGTGGCACGGTCTCCAAGATGTCGAGACCCGCTACCGGCAG
CGCTACGCCGACCTGATGGCCAACGAGGAAACCCGCCGCATCTTCGTCATTCGCGCGAACGCGATCCGAGCCATCCGGCG
CTTCCTCGACGAGCGTGGCTTCCTCGAAGTGGAGACGCCGGTGCTCCAACCGCTGTACGGCGGCGCGGCGGCCAGGCCAT
TCACCACCTATTACAACGCGCTCGACCAGACTTTCTACCTCCGTATCGCCGACGAGCTGTACCTCAAGCGCCTGCTCGTC
GGTGGCTACGAGCGGGTCTACGAGATCGCGAAGGACTTCCGCAACGAGGGAATCGACGCGCGGCACTCGCCCGAGTTCAC
CATGCTCGAGTTCTACATGGCCTACGCCGACTACCACGACGTCATGGAACTGGTCGAAGAGATGTTCGTGTACGTCGCGG
AGCAGGCGCTCGGGACGACGAAGCTCACCTACGCCGGCCACGAGATCGATTTGACCCCGCCCTGGCCCCGCGTGCCACTG
CGCCAGGCACTGATCGACGCCACCGGCATCGACTACCGCGAAGTGACCGACCAGCGCGAACTCTATGAGCGGGCGAAGGC
GCTCGGTGCCGATGTCGAGCCGACCACGGTGTGGCCGCGCATCATCGACGAGCTCATGAAGACGTTCGTCCGCCCCAACC
TCATCCAGCCGACCTTCCTGGTCGACTACCCGGTGGAGCTGTCGCCACTGGCCAAGCGCAGCCCGGAGGATCCCAGCATC
GCCGAGCGCTTCCAGCCCTTCATCGCCGGGATGGAGATGGGGAACGCCTTCACCGAGTTGAACGATCCAATGGATCAGCT
CGAGCGCTTCCTGGCGCAGGCCCGCGACCGCGCGGCCGGTGACCTCGAGGCGATGCCGATCGACGACGACTTCATCAACG
CTCTGATGTACGGTATGCCGCCCACCGGTGGCTTCGGGCTGGGAATCGACCGGCTGACGATGCTGCTGACCGACCAGCAG
AACATCCGTGAGGTCATCCTCTTCCCGCACCTGCGCTCCAAGCCGACTCCGATCCTCGCCGGCCTTCCGACCCCGAGCAC
AGAGACGGACGATGACGCGTAG

Protein sequence :
MIELNEQQRQRLEKAEALREQGIDPYPPHSHRTHTAEEALARFTEIEPTLDTEHDPETITVAGRVTAVRDMGKSVFAHIR
DGSGAIQVYLRRNVVGDDALAHFKRFIDLGDFIEAEGNLFRTRTGEVTVEVKAFRLLAKAINPPPEKWHGLQDVETRYRQ
RYADLMANEETRRIFVIRANAIRAIRRFLDERGFLEVETPVLQPLYGGAAARPFTTYYNALDQTFYLRIADELYLKRLLV
GGYERVYEIAKDFRNEGIDARHSPEFTMLEFYMAYADYHDVMELVEEMFVYVAEQALGTTKLTYAGHEIDLTPPWPRVPL
RQALIDATGIDYREVTDQRELYERAKALGADVEPTTVWPRIIDELMKTFVRPNLIQPTFLVDYPVELSPLAKRSPEDPSI
AERFQPFIAGMEMGNAFTELNDPMDQLERFLAQARDRAAGDLEAMPIDDDFINALMYGMPPTGGFGLGIDRLTMLLTDQQ
NIREVILFPHLRSKPTPILAGLPTPSTETDDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 7e-100 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sthe_1110 YP_003319368.1 lysyl-tRNA synthetase VFG1668 Protein 4e-100 45