Gene Information

Name : cobT (DhcVS_595)
Accession : YP_003330072.1
Strain : Dehalococcoides sp. VS
Genome accession: NC_013552
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG2038
EC number : -
Position : 560538 - 561596 bp
Length : 1059 bp
Strand : +
Note : -

DNA sequence : 
ATGGAACTATTAAATGCAACACTGGCAAAGATACACGGCTTGGATAAAGAGGCCATGACCAAGGCTCAGGCCCATCAGGA
CACGCTGACTAAACCTCAGGGGTCTTTAGGCAAGCTGGAAGCCATTGCGGTTCAGCTTGCAGGCATTCAGGGGAATGCCA
AGCCCCAAACTGCCCGCAAAGCCATTATAACTATGGCTGGCGACCACGGCATTATTGATGAAAAGTTTCACAACTGGCCG
AAAGAAGTAACCGCTCAGATGCTGCAAAATTTCGCCCATGGCGGTGCCGCCATAAATGTCCTTTCCATGCAGGTGGGAGC
GCGTAATGTGGTGGTTGCTTTGGGGGTGGCTACCCCCATGGCGGAAGACCCGAATATAATCAACCGCAATATTGCCCCCG
GTACCAATAACATGGTTCATGGTCCGGCTATGACCCGCGAACAGGCGATAAAAGCTATTGAAACCGGTATAGAGATTGTA
AACGCCGAGGTTAAAAAAGGGCTGGATTTAGTAGGTACCGGTGATATGGGTATCGGCAATACTTCCCCCTCCGCTGCTAT
TTGCTCTGTCATTACCGGGAGGGCACTTGAAGATGTAACCGGGCGGGGTACCGGTGCGTCAGACGAACAGATGAAACTAA
AACGCAACGCCATTGCCAAGGCAATTGCACTTAACAAACCCAATGCCAAAGATGCGCTGGATGTGCTGTCTAAGGTGGGC
GGCTATGAAATAGGCGGTCTGGCAGGGGTAATACTGGGTGCGGCGGCCAATAGAGTGGGGGTGGTTGTAGATGGCTTTAT
TTCAGGTGCGGCGGCACTTATTGCGTATACTATTTGCCCGCAGGCAAAGGATTTTATGTTTGCCGCTCACCAGTCGGTAG
AGCCGGGACACCGTATTTTGCTTGAACACATGGGGCTGGATGCTATTTTGAAAATGGATATGCGGCTGGGTGAAGGCACA
GGTGCCGCCCTTGCCATGAATATTATCGAAGCATCCAACCGTATCCAGCACGAGATGGCCTCTTTTGCAGATGCAGGGGT
TTCCGAAAAGCAAAGTTAG

Protein sequence : 
MELLNATLAKIHGLDKEAMTKAQAHQDTLTKPQGSLGKLEAIAVQLAGIQGNAKPQTARKAIITMAGDHGIIDEKFHNWP
KEVTAQMLQNFAHGGAAINVLSMQVGARNVVVALGVATPMAEDPNIINRNIAPGTNNMVHGPAMTREQAIKAIETGIEIV
NAEVKKGLDLVGTGDMGIGNTSPSAAICSVITGRALEDVTGRGTGASDEQMKLKRNAIAKAIALNKPNAKDALDVLSKVG
GYEIGGLAGVILGAAANRVGVVVDGFISGAAALIAYTICPQAKDFMFAAHQSVEPGHRILLEHMGLDAILKMDMRLGEGT
GAALAMNIIEASNRIQHEMASFADAGVSEKQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cobT YP_853092.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Not tested PAI IV APEC-O1 Protein 1e-57 45