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Name : Dd586_1005 (Dd586_1005) Accession : YP_003332595.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1114203 - 1116017 bp Length : 1815 bp Strand : + Note : TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: dze:Dd1591_3095 protein-export membrane protein SecD DNA sequence : ATGCTGATCGTGACGATCGTCGTCGGTCTGCTCTACGCACTTCCTAACCTGTATGGTGAGGATCCGGCAATTCAGGTCAC TGGCGCGCGAGGAACCGCCGCCAGTGAATCTACGCTGGTCCAGATCCAGAATGTTTTGCAAGAACAACATATCGCCAGCA AATCTATTGCGCTGGAAAACGGTGCTATTCTCGCACGCTTCTCTACGCCGGACATCCAGCTTCGCGCTCGTGAAGTTCTG TTGAGTGCGTTGGGCGAGAAATACGTGGTTGCCTTAAACCTGGCACCTGCTACGCCGACCTGGCTGAGAATGCTGGGGGC GGAACCGATGAAACTGGGTCTTGACCTGCGTGGCGGTGTGCACTTCCTGATGGAAGTGGATATGGATACCGCGTTAGGCA AGTTGCAGGAACAGACCATGGATTCCCTGCGCAGCGATCTGCGCGAGAAAGGCATCCAATATGCGTCTGTTCGTAAAGCA GATAATTATGGCGTGGAAATTCTGTTCCGCGACGGTCAACTGCGTGACAACGCAGTGAACTACCTGACTCCGCGCCATCG CGATCTGGTGTTCAACAATAGCGGCAGTGATGCGCTGCGTGCGGTGATGAGCGATGCGCGGCTGAGCGAAGCCCGCGAAT ACGCGGTACAGCAGAACATCAATATCCTGCGAAACCGTGTCAACCAGCTTGGTGTGGCTGAACCCTTGGTACAGCGTCAG GGTGCTGACCGTATCGTGGTAGAGCTGCCGGGTATTCAGGACACGGCGCGTGCGAAAGAAATTCTGGGGGCGACCGCCAC ACTGGAATTCCGTCTGGTGAACAGCAATGTTGACCCAGCGGCGTTAGCCAGCGGTCGTGTGCCGGGCGATACCGAAGTCA TGAACATGCGTGACGGTGGGCCGATAGCGTTGTACAAACGCGTGATTCTTACCGGTGACCATATTACCGACTCTACCTCC GGTAATGATGAATACAACCGTCCGCAGGTGAATATCTCGTTGGATAGCGCTGGCGGCAACATGATGTCCAATTTCACCAA GGACAACATCGGTAAACCGATGGCGACCCTGTTTGTGGAATACAAGGATAGCGGCAAGAAAGACGCCAACGGTCGTGCGA TTCTGGAAAAACAGGAAGAGGTAATTAACGTCGCCACTATCCAGTCTCGTCTGGGCAATAGCTTCCGTATTACCGGTATC GACAACCCGAACGAAGCGCGACAGCTGTCGCTGCTGCTGCGTGCCGGTGCGCTGATTGCGCCGATTCAGATTGTAGAAGA ACGTACCATCGGCCCGACGCTGGGGATGCAAAACATCACTCAGGGGCTGGAAGCTTGTCTGGCCGGTCTGGCGGTGTCTA TCCTGTTCATGATCTTCTTCTATAAGAAGTTCGGCCTGATTGCGACTTCTGCGCTGTTGTTGAACCTGGTGCTGGTGGTC GGGATTATGTCGCTGTTGCCAGGGGCTACGCTGACCATGCCAGGTATTGCGGGTATCGTGTTAACCCTTGCCGTGGCGGT GGATGCTAACGTACTGATTAACGAGCGTATCAAAGAAGAACTCAGCAACGGACGCTCTGTGCAGCAGGCGATTGATGAAG GGTACCGGGGCGCATTTAGCTCCATCTTCGATGCCAACGTCACGACGCTGATTAAAGTCATTATCCTGTATGCGGTGGGC ACCGGCTCGATTAAAGGATTTGCGATTACGACCGGTATTGGCGTGGCAACATCCATGTTTACCGCTATCGTTGGAACCCG TGCCATCGTGAACCTGCTGTACGGCGGCAAGCGCATCAAAAAGCTGTCTATCTGA Protein sequence : MLIVTIVVGLLYALPNLYGEDPAIQVTGARGTAASESTLVQIQNVLQEQHIASKSIALENGAILARFSTPDIQLRAREVL LSALGEKYVVALNLAPATPTWLRMLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLREKGIQYASVRKA DNYGVEILFRDGQLRDNAVNYLTPRHRDLVFNNSGSDALRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDPAALASGRVPGDTEVMNMRDGGPIALYKRVILTGDHITDSTS GNDEYNRPQVNISLDSAGGNMMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILEKQEEVINVATIQSRLGNSFRITGI DNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSILFMIFFYKKFGLIATSALLLNLVLVV GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAIDEGYRGAFSSIFDANVTTLIKVIILYAVG TGSIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-119 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-119 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-119 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-119 | 48 |
