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Name : Dd586_1474 (Dd586_1474) Accession : YP_003333047.1 Strain : Dickeya dadantii Ech586 Genome accession: NC_013592 Putative virulence/resistance : Unknown Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 1668092 - 1672372 bp Length : 4281 bp Strand : + Note : TIGRFAM: YD repeat protein; PFAM: PAAR repeat-containing protein; YD repeat-containing protein; KEGG: dze:Dd1591_1160 YD repeat protein DNA sequence : ATGCTCAACGATATTCTGAGCCGGGTGGCCCGGGTGGGGGCCATGCATGCCGGAAACCGTCCCAACCCGCCCGCCGACCG GCCGCAACCCTGTCAGGGTAAACCGCCAACGTCGCCGGGTAAGACCATCAAACACAAGAGTTTTCTCGGTGCACTGGCCG GGGCCGTGGCCGGGGCGCTGGTGGCAGCGGCCGTGGCAGCCGTGGCGGTATTTCTGGTGGGGGTGACCGGCGGACTGGCG GTGGCGGCCGTCGGGGCACTGGCCGTGTTTGCCGCCGGTGACCTGATTTCCGCCGTCACCAACAAGGTGTCGGCGATGGT GGACAGTGCGTCACCGGCCTTCGGGCCGGTGGCGTCCGGCTCGGGTAACGTGTTTGTTGAAAAACAGCCCGTCGCCCGCG CCACGAAAGACACCGTTGCCTGCACCAAGCACAACAGCCCGCAACTGATTGCCCAGGGCAGCGAGTCGGTGTTCGTGAAC GACGCACCAGCCGCCCGTATCGACGATAAAACCGTCTGTGGTGCCACTATCAAGGAAGGGGCCTCAACGGTATTTTTCGG CTCCGGGCAGGGCACCTATCTGGAGATTGCCGACGAGTTCAGTTGGTGGGAAAAGGCGCTGCTGATTGCGGTGGAGTTTC TGGTACCGCCCAGTCGTGGGATGTTCAGGGGGCTGGGTAAACTGTTCACCCGCGGGCCGATGGCGGTACTAAAAGGGATG CGCGCCGGGGCGCTGAAAACGCTGGAAGGACTGAAAAGCGCCGTTAAATGTGCCAGTGACGGATTTCGCAACAATAAGGG GCTGTCGCGTGTCACGGAAGCGGTGCGCGGCTTCCTCAAAGACCCGGTCTACATCGCCAGCGGCGAGGTGATTGAATCCC GTACCGATATCGCGCTGGGCCAGACGCTGCCGCTGGTGTTCGAACGCACCTACCGCTCCGCCTCCGGGCATGTCGGGCTG CTGGGCCGCGGCTGGCACGACAGCTGGAGCGAGGTGGCGACGGTAACGCGCGACGGCCTCAACACCCACGTGGTCATCAC GCTGGCTCAGGGCTACGACATCGATTTTACCTTCCATCAGGACGTACAGGCGGTGTACTGCCCGCACTACCCTGAATTTA CCCTGCACCGCCGGGGCGACGGTTTCAGCCTGTGGCACCGCGACCAGCAGACCTGGCGCGACTTTAGCGTGGTACAGGGC GAGCGCCGGTTGCTGTCGGCCCTTCACGATAGCCACGACAACCGCATCGAGCTGGTGCGCGACCCGAAAGGCTACCTGCG CCAGGTGCGCCACAGCGACGGCGTCACTCTGCTGCTGGTGTGGCAGGGCGAATTCCTGCACCAGATACAACGCATCGATG GCGGCCAGAAGACGCTGCTGGCCGAGTACCGGCAGGACGAACAGGGCCGACTGGTGGAAGCCAACGCCACCCACGCCTAT CACCTCTATTACGAGTACGACACCGCCCACCGGCTGACCCGCTGGCACGATAACGACCAGACCTGGGCGCGCTACGAATA CGACGCACAGGGGCGTTGCGTCTACACCACCTGCGCCGACGGTTTTCTGACCGCCCGCTTCGATTACCTGCCCGACCGGG TGGTGATGACCGACGGCCTCGGCCAGCGCAGCGAATTCGGTTTCAACGACCTGCACCTGATGAGCTGGGAACAATCCCCG CTCGGTCACGTCACCCGCTACGACTACGACGAGGTCGGCAACCTGCTGCGGGAAATCTCGCCCGCCGGGCGGGTGGTCGA GTTCGGTTATCTCGATGACACCGGGCGGGTCAGCACCTTTACCGACGCCAGCGGCCACCAGTGGCAGTACGACTACGACG ACGCGCTGCGGCTGTGCGGCGTCACCGACCCGCTGGGCCGCGAGTGGGGCTGGGTGTATGACGCCGAGGGTAACCCGGAG CGGCTCACCGGGCCGGATGCCAGCGAGGTCCGATTCACTTGGAACCGCTACGGCCTGCTGACCCAGGTCAGTGACGCCGC CGGTGAGGTACAGGCGCGGTTGCAGTACGACCATCGCCAGCGGCTGCTGAGTGCCACTGACGCCGAGAGCCGCACCCGGC AGTTACGCTACGACGGGCAGGACCGGGTGGTGCAGTGGCAACGGGCGGACGGTGCCCGTTTCCGGCTCGGCTACCGCCGG GCCAGCTGGACACTGCCGGAGCAGCTGATACGCCCGGACGACAAGGAAGAACTGCGCCAGTACGACCGCCACAACAACCT GCTGAGCTACGTGGACGGCAACGGCGCGCTGTGGCGTCAGACCTTCGGCCCGTTCGACCTGCTGACCGCCCGCACCGACG CCGAAGGCCGCACCTGGCACTACGCGTACGATAAAGAGAGCCAGCAACTGACAGCGGTTATTGCCCCGGACGGCAGCCGC TGGCAGTGGTGGCTGGATGCCGACGGGCGGGTCATCCGCGAGCGTGACATGACCGGCACCGAGACCCACTACAGCTACGA CGAGGACGGCCTGTGCGTCAGCGTGCGCAACGGCGAAGGCGACACCCGTCACTTCCTCTACGACGCCCGCGGCCTGCTGT TGCGTGAAACCGCGCCGGACGACACCCTGCACTACCGGTACGATGCGGTGGGCCGCCTGACCGAGGTCTCGTCAGCCACC GCCCATGTGCAACTGGACTACGACCTGTGCGACCGGGTGGTGCGTGAATGGCACAACGGCACGCTGCTCACCCGCCAGTA CGATGACGCGGCCCGCACCGTCACCCGCACCCTGACCTGGGACGGCGACGCCGATGACACCACCGGCACCCTCGCGCCGC TCACCAGTCTGTTCCATTACACCCGCACCGGCGAGCTGCGGCAGGTGCAGTTGCCGGACGGTGCCGACCTGACCCTGACC CATGACGCGGCGGGCCGCGAGTCACACCGTCGCGGCGGCAGCGGCTTTGTCCAGCAGCGGGAATACGACGTGATGGGCTG GCTGACGCGGGAGATGAGCGGTGCACAGCACGACGGCCACCTGTTGGCGGCACAGACGCGGGAATACCGCTACGACGGTG CCGGTAACCTGACCGGGGTGCGTCACAATCGCGACGCCGAAGGTTATCGTCTGGACGCCACCGGCCGGGTGCAGGCAGTG CTGAGCGGCGGTGCGGGCAAACCGGTGGACACCCTCGCCCGCTTCCACTACACCCGCAGCGGCCTGCCACAGGAGGCAGG CCGCCTCACCGAGTGGCAGTCTGGCCGACTGGTGCAGCACGATGACACCCATTACCAGTACGACAGGGCCGGACGGCTCA TCCGTAAACAGGTGGTGCAGCCGGGCTACCGTCCGCAGGTGTGGCAGTACCGCTGGGACAGTCGCAACCAGCTGCGGGTG GTGGATACCCCGACCGGCGAGCGCTGGCTGTACCGTTACGACCCGTTCGGTCGCCGGGTGGGCAAACGCTGCGACCAGAA AGCCGAAGAAATTCGCTACCAGTGGGATGGCGACCAGATAGCGGAAATCCGCCACTACCGCCACGGCCAGCTCGTGGCCC GTCGCCACTGGGTCTACAACGGCTGGGAGCTGGTGGTACAGCAGCGCCAGCACACTGGCGGTGACTGGGAAACGGATTTT GTGACCAGCAGCCAGAACGGTACCCCACAGGCGCTGTTCACACCGGACGGCACCCTGCGCTGGCAGGCCCCGAAAGCCAC GCTGTGGGGCCAGCGTCAGGCAGAAAAATCGGAAAGTCCGGACCCCGGCCTGGCCTTCGCCGGGCAGCTCCGTGACAGCG AAAGCGGGCTGTGCTATAACCGCTTTCGGTACTACGACCCGGCCGGTGGGTGCTATGTCTCGCCTGACCCGATAGGGGTG CTGGGGGGGGAGAGTAATTACGGGTATGTATACAACCCTATAAGCGGTATTGACCCTTTAGGTCTAAACGGTAAGAAATG TATGGGTGTTAGTGAATCAGGTCATCACGTTCCATCCGTAAGAAAATCACAGGGAAGGCCTTTTGAGGTTGCACGCTCCG ATAAAACCCGCCCGACTTTATTTCCTAGGGGTAAAGAGCCAGAACATGATCATTGGCGAATGCATGATGCAGAAAGAAAA TATGTAGGCCCAAGGCAAGGTGATTTTGCTGGTTCTGACAAAGAGTTGTTTGATGCTTATAAGAAAGCGTATTCGAGTTT GGACGATATCAAAGTGGATGTTCGTTCTCCAAATGGTACACATATATTGGGTTCAAATGTAACACCGAGCCAAGCCGTAG ACCTAATTGAAAACTGGCTTACCAAACAAGGGTTGATGTAA Protein sequence : MLNDILSRVARVGAMHAGNRPNPPADRPQPCQGKPPTSPGKTIKHKSFLGALAGAVAGALVAAAVAAVAVFLVGVTGGLA VAAVGALAVFAAGDLISAVTNKVSAMVDSASPAFGPVASGSGNVFVEKQPVARATKDTVACTKHNSPQLIAQGSESVFVN DAPAARIDDKTVCGATIKEGASTVFFGSGQGTYLEIADEFSWWEKALLIAVEFLVPPSRGMFRGLGKLFTRGPMAVLKGM RAGALKTLEGLKSAVKCASDGFRNNKGLSRVTEAVRGFLKDPVYIASGEVIESRTDIALGQTLPLVFERTYRSASGHVGL LGRGWHDSWSEVATVTRDGLNTHVVITLAQGYDIDFTFHQDVQAVYCPHYPEFTLHRRGDGFSLWHRDQQTWRDFSVVQG ERRLLSALHDSHDNRIELVRDPKGYLRQVRHSDGVTLLLVWQGEFLHQIQRIDGGQKTLLAEYRQDEQGRLVEANATHAY HLYYEYDTAHRLTRWHDNDQTWARYEYDAQGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEQSP LGHVTRYDYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWQYDYDDALRLCGVTDPLGREWGWVYDAEGNPE RLTGPDASEVRFTWNRYGLLTQVSDAAGEVQARLQYDHRQRLLSATDAESRTRQLRYDGQDRVVQWQRADGARFRLGYRR ASWTLPEQLIRPDDKEELRQYDRHNNLLSYVDGNGALWRQTFGPFDLLTARTDAEGRTWHYAYDKESQQLTAVIAPDGSR WQWWLDADGRVIRERDMTGTETHYSYDEDGLCVSVRNGEGDTRHFLYDARGLLLRETAPDDTLHYRYDAVGRLTEVSSAT AHVQLDYDLCDRVVREWHNGTLLTRQYDDAARTVTRTLTWDGDADDTTGTLAPLTSLFHYTRTGELRQVQLPDGADLTLT HDAAGRESHRRGGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVRHNRDAEGYRLDATGRVQAV LSGGAGKPVDTLARFHYTRSGLPQEAGRLTEWQSGRLVQHDDTHYQYDRAGRLIRKQVVQPGYRPQVWQYRWDSRNQLRV VDTPTGERWLYRYDPFGRRVGKRCDQKAEEIRYQWDGDQIAEIRHYRHGQLVARRHWVYNGWELVVQQRQHTGGDWETDF VTSSQNGTPQALFTPDGTLRWQAPKATLWGQRQAEKSESPDPGLAFAGQLRDSESGLCYNRFRYYDPAGGCYVSPDPIGV LGGESNYGYVYNPISGIDPLGLNGKKCMGVSESGHHVPSVRKSQGRPFEVARSDKTRPTLFPRGKEPEHDHWRMHDAERK YVGPRQGDFAGSDKELFDAYKKAYSSLDDIKVDVRSPNGTHILGSNVTPSQAVDLIENWLTKQGLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 42 |
